Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 AC125350.1-201ENSMUST00000225115 903 ntBASIC20■□□□□ 0.79
Stag1Q9D3E6 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20■□□□□ 0.79
Stag1Q9D3E6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Stag1Q9D3E6 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Stag1Q9D3E6 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Stag1Q9D3E6 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Stag1Q9D3E6 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Stag1Q9D3E6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Stag1Q9D3E6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Stag1Q9D3E6 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.99■□□□□ 0.79
Stag1Q9D3E6 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Stag1Q9D3E6 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.99■□□□□ 0.79
Stag1Q9D3E6 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
Stag1Q9D3E6 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Stag1Q9D3E6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Stag1Q9D3E6 Gm18421-201ENSMUST00000204122 625 ntBASIC19.99■□□□□ 0.79
Stag1Q9D3E6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.99■□□□□ 0.79
Stag1Q9D3E6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Stag1Q9D3E6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Stag1Q9D3E6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Stag1Q9D3E6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Stag1Q9D3E6 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Stag1Q9D3E6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Stag1Q9D3E6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.98■□□□□ 0.79
Stag1Q9D3E6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.98■□□□□ 0.79
Stag1Q9D3E6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Stag1Q9D3E6 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Stag1Q9D3E6 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Stag1Q9D3E6 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Stag1Q9D3E6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Stag1Q9D3E6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Stag1Q9D3E6 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Stag1Q9D3E6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Stag1Q9D3E6 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Stag1Q9D3E6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Stag1Q9D3E6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Stag1Q9D3E6 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.98■□□□□ 0.79
Stag1Q9D3E6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Stag1Q9D3E6 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Stag1Q9D3E6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Stag1Q9D3E6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Stag1Q9D3E6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Stag1Q9D3E6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Stag1Q9D3E6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Stag1Q9D3E6 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.97■□□□□ 0.79
Stag1Q9D3E6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.97■□□□□ 0.79
Stag1Q9D3E6 Gm12895-201ENSMUST00000122214 226 ntBASIC19.97■□□□□ 0.79
Stag1Q9D3E6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Stag1Q9D3E6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Stag1Q9D3E6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.97■□□□□ 0.79
Stag1Q9D3E6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Stag1Q9D3E6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Stag1Q9D3E6 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Stag1Q9D3E6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Stag1Q9D3E6 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Stag1Q9D3E6 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.97■□□□□ 0.79
Stag1Q9D3E6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Stag1Q9D3E6 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
Stag1Q9D3E6 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.96■□□□□ 0.79
Stag1Q9D3E6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Stag1Q9D3E6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Stag1Q9D3E6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Stag1Q9D3E6 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Stag1Q9D3E6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Stag1Q9D3E6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.96■□□□□ 0.79
Stag1Q9D3E6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Stag1Q9D3E6 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.96■□□□□ 0.79
Stag1Q9D3E6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Stag1Q9D3E6 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Stag1Q9D3E6 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Stag1Q9D3E6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Stag1Q9D3E6 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Stag1Q9D3E6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Stag1Q9D3E6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Stag1Q9D3E6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Stag1Q9D3E6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Stag1Q9D3E6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Stag1Q9D3E6 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
Stag1Q9D3E6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Stag1Q9D3E6 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Stag1Q9D3E6 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Stag1Q9D3E6 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.95■□□□□ 0.78
Stag1Q9D3E6 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.95■□□□□ 0.78
Stag1Q9D3E6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.95■□□□□ 0.78
Stag1Q9D3E6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Stag1Q9D3E6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Stag1Q9D3E6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Stag1Q9D3E6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Stag1Q9D3E6 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Stag1Q9D3E6 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Stag1Q9D3E6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Stag1Q9D3E6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Stag1Q9D3E6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Stag1Q9D3E6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Stag1Q9D3E6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Stag1Q9D3E6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Stag1Q9D3E6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Stag1Q9D3E6 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Stag1Q9D3E6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Stag1Q9D3E6 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms