Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mms19Q9D071 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mms19Q9D071 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.99■□□□□ 0.47
Mms19Q9D071 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mms19Q9D071 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mms19Q9D071 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mms19Q9D071 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.99■□□□□ 0.47
Mms19Q9D071 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Mms19Q9D071 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mms19Q9D071 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mms19Q9D071 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Mms19Q9D071 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Mms19Q9D071 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Mms19Q9D071 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mms19Q9D071 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mms19Q9D071 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Mms19Q9D071 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mms19Q9D071 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mms19Q9D071 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Mms19Q9D071 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mms19Q9D071 Gm22697-201ENSMUST00000175194 63 ntBASIC17.98■□□□□ 0.47
Mms19Q9D071 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Mms19Q9D071 Gm18101-201ENSMUST00000215769 548 ntBASIC17.98■□□□□ 0.47
Mms19Q9D071 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mms19Q9D071 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mms19Q9D071 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mms19Q9D071 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.98■□□□□ 0.47
Mms19Q9D071 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mms19Q9D071 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mms19Q9D071 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Mms19Q9D071 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.98■□□□□ 0.47
Mms19Q9D071 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mms19Q9D071 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Mms19Q9D071 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mms19Q9D071 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mms19Q9D071 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mms19Q9D071 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mms19Q9D071 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.97■□□□□ 0.47
Mms19Q9D071 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mms19Q9D071 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.97■□□□□ 0.47
Mms19Q9D071 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mms19Q9D071 Mir1668-201ENSMUST00000184114 107 ntBASIC17.97■□□□□ 0.47
Mms19Q9D071 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.97■□□□□ 0.47
Mms19Q9D071 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mms19Q9D071 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Mms19Q9D071 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Mms19Q9D071 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mms19Q9D071 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.97■□□□□ 0.47
Mms19Q9D071 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mms19Q9D071 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Mms19Q9D071 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mms19Q9D071 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Mms19Q9D071 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.96■□□□□ 0.47
Mms19Q9D071 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mms19Q9D071 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mms19Q9D071 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Mms19Q9D071 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Mms19Q9D071 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Mms19Q9D071 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.96■□□□□ 0.47
Mms19Q9D071 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Mms19Q9D071 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mms19Q9D071 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Mms19Q9D071 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mms19Q9D071 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mms19Q9D071 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mms19Q9D071 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mms19Q9D071 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.46
Mms19Q9D071 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Mms19Q9D071 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Mms19Q9D071 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mms19Q9D071 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mms19Q9D071 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mms19Q9D071 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.95■□□□□ 0.46
Mms19Q9D071 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Mms19Q9D071 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Mms19Q9D071 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mms19Q9D071 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.95■□□□□ 0.46
Mms19Q9D071 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Mms19Q9D071 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mms19Q9D071 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Mms19Q9D071 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mms19Q9D071 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mms19Q9D071 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.95■□□□□ 0.46
Mms19Q9D071 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.95■□□□□ 0.46
Mms19Q9D071 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Mms19Q9D071 Gm27000-201ENSMUST00000182943 842 ntBASIC17.95■□□□□ 0.46
Mms19Q9D071 Gm7213-201ENSMUST00000215977 950 ntBASIC17.95■□□□□ 0.46
Mms19Q9D071 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Mms19Q9D071 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Mms19Q9D071 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mms19Q9D071 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.95■□□□□ 0.46
Mms19Q9D071 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Mms19Q9D071 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Mms19Q9D071 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Mms19Q9D071 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mms19Q9D071 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Mms19Q9D071 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Mms19Q9D071 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mms19Q9D071 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mms19Q9D071 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms