Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hdhd3Q9CYW4 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hdhd3Q9CYW4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hdhd3Q9CYW4 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hdhd3Q9CYW4 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Hdhd3Q9CYW4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Hdhd3Q9CYW4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Hdhd3Q9CYW4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Mtag2-201ENSMUST00000058665 714 ntBASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Hdhd3Q9CYW4 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Hdhd3Q9CYW4 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Hdhd3Q9CYW4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Hdhd3Q9CYW4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hdhd3Q9CYW4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hdhd3Q9CYW4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Hdhd3Q9CYW4 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Hdhd3Q9CYW4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hdhd3Q9CYW4 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Hdhd3Q9CYW4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hdhd3Q9CYW4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Hdhd3Q9CYW4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Gm44549-201ENSMUST00000208351 577 ntBASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hdhd3Q9CYW4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms