Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smc3Q9CW03 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc3Q9CW03 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smc3Q9CW03 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Smc3Q9CW03 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smc3Q9CW03 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc3Q9CW03 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc3Q9CW03 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc3Q9CW03 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Smc3Q9CW03 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smc3Q9CW03 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc3Q9CW03 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Smc3Q9CW03 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Smc3Q9CW03 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc3Q9CW03 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Smc3Q9CW03 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Smc3Q9CW03 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Smc3Q9CW03 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Smc3Q9CW03 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Smc3Q9CW03 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc3Q9CW03 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Smc3Q9CW03 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc3Q9CW03 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Smc3Q9CW03 Gm10698-201ENSMUST00000182663 604 ntBASIC19.77■□□□□ 0.76
Smc3Q9CW03 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.77■□□□□ 0.76
Smc3Q9CW03 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Smc3Q9CW03 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Smc3Q9CW03 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Smc3Q9CW03 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smc3Q9CW03 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc3Q9CW03 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc3Q9CW03 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc3Q9CW03 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc3Q9CW03 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc3Q9CW03 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc3Q9CW03 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc3Q9CW03 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc3Q9CW03 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smc3Q9CW03 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Smc3Q9CW03 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Smc3Q9CW03 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc3Q9CW03 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Smc3Q9CW03 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc3Q9CW03 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc3Q9CW03 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Smc3Q9CW03 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc3Q9CW03 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.75■□□□□ 0.75
Smc3Q9CW03 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc3Q9CW03 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.75■□□□□ 0.75
Smc3Q9CW03 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc3Q9CW03 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc3Q9CW03 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc3Q9CW03 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.75■□□□□ 0.75
Smc3Q9CW03 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Smc3Q9CW03 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc3Q9CW03 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smc3Q9CW03 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smc3Q9CW03 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc3Q9CW03 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc3Q9CW03 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc3Q9CW03 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc3Q9CW03 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc3Q9CW03 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Smc3Q9CW03 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Smc3Q9CW03 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.74■□□□□ 0.75
Smc3Q9CW03 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc3Q9CW03 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.74■□□□□ 0.75
Smc3Q9CW03 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc3Q9CW03 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Smc3Q9CW03 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.74■□□□□ 0.75
Smc3Q9CW03 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc3Q9CW03 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc3Q9CW03 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
Smc3Q9CW03 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smc3Q9CW03 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc3Q9CW03 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
Smc3Q9CW03 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Smc3Q9CW03 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc3Q9CW03 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc3Q9CW03 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Smc3Q9CW03 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smc3Q9CW03 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.73■□□□□ 0.75
Smc3Q9CW03 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc3Q9CW03 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Smc3Q9CW03 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc3Q9CW03 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc3Q9CW03 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc3Q9CW03 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc3Q9CW03 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc3Q9CW03 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc3Q9CW03 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc3Q9CW03 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc3Q9CW03 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc3Q9CW03 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Smc3Q9CW03 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc3Q9CW03 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Smc3Q9CW03 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc3Q9CW03 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc3Q9CW03 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc3Q9CW03 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms