Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Gtf2ird2Q99NI3 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf2ird2Q99NI3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf2ird2Q99NI3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf2ird2Q99NI3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf2ird2Q99NI3 Gm26039-201ENSMUST00000158152 144 ntBASIC17.29■□□□□ 0.36
Gtf2ird2Q99NI3 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf2ird2Q99NI3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Gtf2ird2Q99NI3 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf2ird2Q99NI3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf2ird2Q99NI3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf2ird2Q99NI3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf2ird2Q99NI3 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf2ird2Q99NI3 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Gtf2ird2Q99NI3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf2ird2Q99NI3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf2ird2Q99NI3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf2ird2Q99NI3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf2ird2Q99NI3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Gtf2ird2Q99NI3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.28■□□□□ 0.36
Gtf2ird2Q99NI3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf2ird2Q99NI3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf2ird2Q99NI3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf2ird2Q99NI3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf2ird2Q99NI3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf2ird2Q99NI3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf2ird2Q99NI3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.28■□□□□ 0.36
Gtf2ird2Q99NI3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Gtf2ird2Q99NI3 Gm25016-201ENSMUST00000158399 131 ntBASIC17.28■□□□□ 0.36
Gtf2ird2Q99NI3 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf2ird2Q99NI3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Gtf2ird2Q99NI3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf2ird2Q99NI3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf2ird2Q99NI3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf2ird2Q99NI3 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf2ird2Q99NI3 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Gtf2ird2Q99NI3 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.28■□□□□ 0.36
Gtf2ird2Q99NI3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Gtf2ird2Q99NI3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Gtf2ird2Q99NI3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Gtf2ird2Q99NI3 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gtf2ird2Q99NI3 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gtf2ird2Q99NI3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gtf2ird2Q99NI3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Gtf2ird2Q99NI3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Gtf2ird2Q99NI3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gtf2ird2Q99NI3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gtf2ird2Q99NI3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gtf2ird2Q99NI3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gtf2ird2Q99NI3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.27■□□□□ 0.36
Gtf2ird2Q99NI3 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gtf2ird2Q99NI3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Gtf2ird2Q99NI3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Gtf2ird2Q99NI3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Gtf2ird2Q99NI3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Gtf2ird2Q99NI3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gtf2ird2Q99NI3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf2ird2Q99NI3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf2ird2Q99NI3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf2ird2Q99NI3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf2ird2Q99NI3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf2ird2Q99NI3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Gtf2ird2Q99NI3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Gtf2ird2Q99NI3 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf2ird2Q99NI3 Gm11355-201ENSMUST00000121120 306 ntBASIC17.26■□□□□ 0.35
Gtf2ird2Q99NI3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf2ird2Q99NI3 Gm9013-201ENSMUST00000132939 882 ntBASIC17.26■□□□□ 0.35
Gtf2ird2Q99NI3 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Gtf2ird2Q99NI3 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf2ird2Q99NI3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.26■□□□□ 0.35
Gtf2ird2Q99NI3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Gtf2ird2Q99NI3 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf2ird2Q99NI3 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf2ird2Q99NI3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Gtf2ird2Q99NI3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf2ird2Q99NI3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Gtf2ird2Q99NI3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf2ird2Q99NI3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gtf2ird2Q99NI3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gtf2ird2Q99NI3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf2ird2Q99NI3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf2ird2Q99NI3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf2ird2Q99NI3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf2ird2Q99NI3 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.25■□□□□ 0.35
Gtf2ird2Q99NI3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.25■□□□□ 0.35
Gtf2ird2Q99NI3 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.25■□□□□ 0.35
Gtf2ird2Q99NI3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Gtf2ird2Q99NI3 Gm10566-201ENSMUST00000086739 996 ntBASIC17.25■□□□□ 0.35
Gtf2ird2Q99NI3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf2ird2Q99NI3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf2ird2Q99NI3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gtf2ird2Q99NI3 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Gtf2ird2Q99NI3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.24■□□□□ 0.35
Gtf2ird2Q99NI3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Gtf2ird2Q99NI3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Gtf2ird2Q99NI3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf2ird2Q99NI3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf2ird2Q99NI3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf2ird2Q99NI3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf2ird2Q99NI3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms