Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Msh4Q99MT2 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh4Q99MT2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Msh4Q99MT2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh4Q99MT2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh4Q99MT2 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh4Q99MT2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh4Q99MT2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh4Q99MT2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh4Q99MT2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.4■□□□□ 0.22
Msh4Q99MT2 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh4Q99MT2 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh4Q99MT2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh4Q99MT2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.4■□□□□ 0.22
Msh4Q99MT2 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Msh4Q99MT2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh4Q99MT2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh4Q99MT2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Msh4Q99MT2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Msh4Q99MT2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Msh4Q99MT2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Msh4Q99MT2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.22
Msh4Q99MT2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh4Q99MT2 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.39■□□□□ 0.21
Msh4Q99MT2 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Msh4Q99MT2 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh4Q99MT2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Msh4Q99MT2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Msh4Q99MT2 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh4Q99MT2 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.39■□□□□ 0.21
Msh4Q99MT2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.39■□□□□ 0.21
Msh4Q99MT2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.39■□□□□ 0.21
Msh4Q99MT2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.39■□□□□ 0.21
Msh4Q99MT2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Msh4Q99MT2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Msh4Q99MT2 Gm27463-201ENSMUST00000183569 57 ntBASIC16.39■□□□□ 0.21
Msh4Q99MT2 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.39■□□□□ 0.21
Msh4Q99MT2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh4Q99MT2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Msh4Q99MT2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Msh4Q99MT2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh4Q99MT2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh4Q99MT2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh4Q99MT2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh4Q99MT2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh4Q99MT2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh4Q99MT2 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.39■□□□□ 0.21
Msh4Q99MT2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Msh4Q99MT2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Msh4Q99MT2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Msh4Q99MT2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Msh4Q99MT2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Msh4Q99MT2 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh4Q99MT2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Msh4Q99MT2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Msh4Q99MT2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Msh4Q99MT2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Msh4Q99MT2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Msh4Q99MT2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.38■□□□□ 0.21
Msh4Q99MT2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Msh4Q99MT2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Msh4Q99MT2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Msh4Q99MT2 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh4Q99MT2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh4Q99MT2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Msh4Q99MT2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Msh4Q99MT2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Msh4Q99MT2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Msh4Q99MT2 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh4Q99MT2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh4Q99MT2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh4Q99MT2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Msh4Q99MT2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.37■□□□□ 0.21
Msh4Q99MT2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh4Q99MT2 Gm7889-201ENSMUST00000185591 958 ntBASIC16.37■□□□□ 0.21
Msh4Q99MT2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Msh4Q99MT2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh4Q99MT2 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh4Q99MT2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Msh4Q99MT2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Msh4Q99MT2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Msh4Q99MT2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh4Q99MT2 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.36■□□□□ 0.21
Msh4Q99MT2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.36■□□□□ 0.21
Msh4Q99MT2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh4Q99MT2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh4Q99MT2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.36■□□□□ 0.21
Msh4Q99MT2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.36■□□□□ 0.21
Msh4Q99MT2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.36■□□□□ 0.21
Msh4Q99MT2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh4Q99MT2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Msh4Q99MT2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Msh4Q99MT2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh4Q99MT2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh4Q99MT2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.36■□□□□ 0.21
Msh4Q99MT2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Msh4Q99MT2 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Msh4Q99MT2 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Msh4Q99MT2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Msh4Q99MT2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms