Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfc4Q99J62 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfc4Q99J62 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfc4Q99J62 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Rfc4Q99J62 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rfc4Q99J62 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rfc4Q99J62 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rfc4Q99J62 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rfc4Q99J62 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.34■□□□□ 0.69
Rfc4Q99J62 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfc4Q99J62 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rfc4Q99J62 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Rfc4Q99J62 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.34■□□□□ 0.69
Rfc4Q99J62 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfc4Q99J62 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfc4Q99J62 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Rfc4Q99J62 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfc4Q99J62 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfc4Q99J62 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfc4Q99J62 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfc4Q99J62 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rfc4Q99J62 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfc4Q99J62 Gm29707-201ENSMUST00000196325 491 ntBASIC19.33■□□□□ 0.68
Rfc4Q99J62 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfc4Q99J62 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfc4Q99J62 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfc4Q99J62 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rfc4Q99J62 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.33■□□□□ 0.68
Rfc4Q99J62 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rfc4Q99J62 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Rfc4Q99J62 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfc4Q99J62 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfc4Q99J62 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.32■□□□□ 0.68
Rfc4Q99J62 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.32■□□□□ 0.68
Rfc4Q99J62 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rfc4Q99J62 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rfc4Q99J62 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.32■□□□□ 0.68
Rfc4Q99J62 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rfc4Q99J62 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfc4Q99J62 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rfc4Q99J62 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.32■□□□□ 0.68
Rfc4Q99J62 Rps4l-201ENSMUST00000071745 943 ntBASIC19.32■□□□□ 0.68
Rfc4Q99J62 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfc4Q99J62 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfc4Q99J62 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC19.32■□□□□ 0.68
Rfc4Q99J62 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rfc4Q99J62 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rfc4Q99J62 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfc4Q99J62 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfc4Q99J62 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfc4Q99J62 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc4Q99J62 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc4Q99J62 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc4Q99J62 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Rfc4Q99J62 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rfc4Q99J62 Rprl3-201ENSMUST00000157400 290 ntBASIC19.31■□□□□ 0.68
Rfc4Q99J62 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc4Q99J62 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.31■□□□□ 0.68
Rfc4Q99J62 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC19.31■□□□□ 0.68
Rfc4Q99J62 Gm18206-201ENSMUST00000207027 926 ntBASIC19.31■□□□□ 0.68
Rfc4Q99J62 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.31■□□□□ 0.68
Rfc4Q99J62 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc4Q99J62 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc4Q99J62 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc4Q99J62 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc4Q99J62 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfc4Q99J62 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfc4Q99J62 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfc4Q99J62 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfc4Q99J62 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.3■□□□□ 0.68
Rfc4Q99J62 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfc4Q99J62 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfc4Q99J62 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfc4Q99J62 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Rfc4Q99J62 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfc4Q99J62 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfc4Q99J62 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.3■□□□□ 0.68
Rfc4Q99J62 Gm44450-201ENSMUST00000199528 114 ntBASIC19.3■□□□□ 0.68
Rfc4Q99J62 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfc4Q99J62 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfc4Q99J62 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfc4Q99J62 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.3■□□□□ 0.68
Rfc4Q99J62 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfc4Q99J62 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfc4Q99J62 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfc4Q99J62 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfc4Q99J62 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.29■□□□□ 0.68
Rfc4Q99J62 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfc4Q99J62 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.29■□□□□ 0.68
Rfc4Q99J62 Gm25925-201ENSMUST00000158314 306 ntBASIC19.29■□□□□ 0.68
Rfc4Q99J62 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.29■□□□□ 0.68
Rfc4Q99J62 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.29■□□□□ 0.68
Rfc4Q99J62 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rfc4Q99J62 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfc4Q99J62 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Rfc4Q99J62 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.29■□□□□ 0.68
Rfc4Q99J62 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfc4Q99J62 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Rfc4Q99J62 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Rfc4Q99J62 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms