Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb18Q91Y02 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb18Q91Y02 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb18Q91Y02 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb18Q91Y02 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb18Q91Y02 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb18Q91Y02 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb18Q91Y02 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pcdhb18Q91Y02 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb18Q91Y02 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb18Q91Y02 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb18Q91Y02 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb18Q91Y02 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhb18Q91Y02 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb18Q91Y02 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb18Q91Y02 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb18Q91Y02 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhb18Q91Y02 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb18Q91Y02 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb18Q91Y02 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb18Q91Y02 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb18Q91Y02 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb18Q91Y02 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb18Q91Y02 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb18Q91Y02 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb18Q91Y02 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb18Q91Y02 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb18Q91Y02 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb18Q91Y02 AC133598.3-202ENSMUST00000224219 531 ntBASIC17.56■□□□□ 0.4
Pcdhb18Q91Y02 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb18Q91Y02 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb18Q91Y02 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb18Q91Y02 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb18Q91Y02 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb18Q91Y02 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb18Q91Y02 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Pcdhb18Q91Y02 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb18Q91Y02 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb18Q91Y02 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb18Q91Y02 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb18Q91Y02 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb18Q91Y02 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb18Q91Y02 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.55■□□□□ 0.4
Pcdhb18Q91Y02 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb18Q91Y02 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb18Q91Y02 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Pcdhb18Q91Y02 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb18Q91Y02 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb18Q91Y02 Olfr129-201ENSMUST00000122318 993 ntBASIC17.55■□□□□ 0.4
Pcdhb18Q91Y02 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.55■□□□□ 0.4
Pcdhb18Q91Y02 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb18Q91Y02 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.55■□□□□ 0.4
Pcdhb18Q91Y02 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Pcdhb18Q91Y02 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb18Q91Y02 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb18Q91Y02 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb18Q91Y02 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb18Q91Y02 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhb18Q91Y02 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb18Q91Y02 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Gm24589-201ENSMUST00000116692 94 ntBASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Gm18115-201ENSMUST00000221209 621 ntBASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb18Q91Y02 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhb18Q91Y02 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb18Q91Y02 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb18Q91Y02 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pcdhb18Q91Y02 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb18Q91Y02 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb18Q91Y02 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhb18Q91Y02 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb18Q91Y02 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb18Q91Y02 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb18Q91Y02 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhb18Q91Y02 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb18Q91Y02 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb18Q91Y02 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.52■□□□□ 0.4
Pcdhb18Q91Y02 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb18Q91Y02 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb18Q91Y02 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms