Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb4Q91XX6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb4Q91XX6 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb4Q91XX6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb4Q91XX6 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb4Q91XX6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb4Q91XX6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhgb4Q91XX6 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhgb4Q91XX6 Mir5122-201ENSMUST00000175004 89 ntBASIC17.79■□□□□ 0.44
Pcdhgb4Q91XX6 Il3ra-202ENSMUST00000223589 738 ntBASIC17.79■□□□□ 0.44
Pcdhgb4Q91XX6 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.79■□□□□ 0.44
Pcdhgb4Q91XX6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb4Q91XX6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb4Q91XX6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb4Q91XX6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb4Q91XX6 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhgb4Q91XX6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb4Q91XX6 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb4Q91XX6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb4Q91XX6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb4Q91XX6 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhgb4Q91XX6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb4Q91XX6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhgb4Q91XX6 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb4Q91XX6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.78■□□□□ 0.44
Pcdhgb4Q91XX6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb4Q91XX6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb4Q91XX6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhgb4Q91XX6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb4Q91XX6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb4Q91XX6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb4Q91XX6 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhgb4Q91XX6 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb4Q91XX6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb4Q91XX6 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhgb4Q91XX6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb4Q91XX6 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhgb4Q91XX6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pcdhgb4Q91XX6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb4Q91XX6 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb4Q91XX6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb4Q91XX6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb4Q91XX6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.77■□□□□ 0.44
Pcdhgb4Q91XX6 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb4Q91XX6 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb4Q91XX6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.77■□□□□ 0.44
Pcdhgb4Q91XX6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb4Q91XX6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb4Q91XX6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb4Q91XX6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb4Q91XX6 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pcdhgb4Q91XX6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb4Q91XX6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhgb4Q91XX6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhgb4Q91XX6 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Pcdhgb4Q91XX6 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhgb4Q91XX6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.43
Pcdhgb4Q91XX6 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Pcdhgb4Q91XX6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.77■□□□□ 0.43
Pcdhgb4Q91XX6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdhgb4Q91XX6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Odf3b-204ENSMUST00000227834 930 ntBASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Pcdhgb4Q91XX6 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb4Q91XX6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb4Q91XX6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb4Q91XX6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdhgb4Q91XX6 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pcdhgb4Q91XX6 Gm18958-201ENSMUST00000174258 762 ntBASIC17.75■□□□□ 0.43
Pcdhgb4Q91XX6 Gm21814-202ENSMUST00000203277 873 ntBASIC17.75■□□□□ 0.43
Pcdhgb4Q91XX6 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms