Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Mir8112-201ENSMUST00000184382 131 ntBASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ddx41Q91VN6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ddx41Q91VN6 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx41Q91VN6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx41Q91VN6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx41Q91VN6 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx41Q91VN6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.26■□□□□ 0.67
Ddx41Q91VN6 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.26■□□□□ 0.67
Ddx41Q91VN6 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ddx41Q91VN6 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ddx41Q91VN6 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx41Q91VN6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.26■□□□□ 0.67
Ddx41Q91VN6 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.26■□□□□ 0.67
Ddx41Q91VN6 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ddx41Q91VN6 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx41Q91VN6 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx41Q91VN6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.26■□□□□ 0.67
Ddx41Q91VN6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ddx41Q91VN6 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.26■□□□□ 0.67
Ddx41Q91VN6 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx41Q91VN6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ddx41Q91VN6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Gm25016-201ENSMUST00000158399 131 ntBASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx41Q91VN6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx41Q91VN6 Gm9867-201ENSMUST00000192212 2647 ntBASIC19.24■□□□□ 0.67
Ddx41Q91VN6 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.24■□□□□ 0.67
Ddx41Q91VN6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx41Q91VN6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx41Q91VN6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx41Q91VN6 Gm27389-201ENSMUST00000183622 195 ntBASIC19.24■□□□□ 0.67
Ddx41Q91VN6 Gm7213-201ENSMUST00000215977 950 ntBASIC19.24■□□□□ 0.67
Ddx41Q91VN6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx41Q91VN6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx41Q91VN6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx41Q91VN6 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx41Q91VN6 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
Ddx41Q91VN6 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx41Q91VN6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx41Q91VN6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx41Q91VN6 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.24■□□□□ 0.67
Ddx41Q91VN6 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx41Q91VN6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Ddx41Q91VN6 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx41Q91VN6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ddx41Q91VN6 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC19.23■□□□□ 0.67
Ddx41Q91VN6 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx41Q91VN6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx41Q91VN6 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx41Q91VN6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.23■□□□□ 0.67
Ddx41Q91VN6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.23■□□□□ 0.67
Ddx41Q91VN6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms