Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb21Q91V48 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb21Q91V48 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb21Q91V48 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb21Q91V48 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb21Q91V48 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhb21Q91V48 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb21Q91V48 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.67■□□□□ 0.26
Pcdhb21Q91V48 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb21Q91V48 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.67■□□□□ 0.26
Pcdhb21Q91V48 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb21Q91V48 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhb21Q91V48 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb21Q91V48 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb21Q91V48 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhb21Q91V48 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhb21Q91V48 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhb21Q91V48 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb21Q91V48 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb21Q91V48 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb21Q91V48 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
Pcdhb21Q91V48 Mir5130-201ENSMUST00000175160 84 ntBASIC16.66■□□□□ 0.26
Pcdhb21Q91V48 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb21Q91V48 Mir7071-201ENSMUST00000184847 69 ntBASIC16.66■□□□□ 0.26
Pcdhb21Q91V48 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.66■□□□□ 0.26
Pcdhb21Q91V48 Gm45058-201ENSMUST00000205810 766 ntBASIC16.66■□□□□ 0.26
Pcdhb21Q91V48 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb21Q91V48 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb21Q91V48 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb21Q91V48 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb21Q91V48 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.66■□□□□ 0.26
Pcdhb21Q91V48 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb21Q91V48 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb21Q91V48 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb21Q91V48 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb21Q91V48 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhb21Q91V48 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 Gm7889-201ENSMUST00000185591 958 ntBASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhb21Q91V48 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb21Q91V48 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb21Q91V48 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb21Q91V48 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb21Q91V48 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.64■□□□□ 0.25
Pcdhb21Q91V48 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Pcdhb21Q91V48 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhb21Q91V48 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb21Q91V48 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhb21Q91V48 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhb21Q91V48 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhb21Q91V48 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhb21Q91V48 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.62■□□□□ 0.25
Pcdhb21Q91V48 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb21Q91V48 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pcdhb21Q91V48 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms