Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vsx1Q91V10 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.6■□□□□ 0.25
Vsx1Q91V10 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vsx1Q91V10 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vsx1Q91V10 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vsx1Q91V10 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Vsx1Q91V10 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.6■□□□□ 0.25
Vsx1Q91V10 Gm1401-201ENSMUST00000122048 772 ntBASIC16.6■□□□□ 0.25
Vsx1Q91V10 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vsx1Q91V10 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.6■□□□□ 0.25
Vsx1Q91V10 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Vsx1Q91V10 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Vsx1Q91V10 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vsx1Q91V10 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vsx1Q91V10 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vsx1Q91V10 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Vsx1Q91V10 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Vsx1Q91V10 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vsx1Q91V10 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vsx1Q91V10 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vsx1Q91V10 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Vsx1Q91V10 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vsx1Q91V10 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vsx1Q91V10 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Vsx1Q91V10 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vsx1Q91V10 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vsx1Q91V10 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vsx1Q91V10 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.59■□□□□ 0.25
Vsx1Q91V10 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vsx1Q91V10 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.59■□□□□ 0.25
Vsx1Q91V10 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vsx1Q91V10 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vsx1Q91V10 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Vsx1Q91V10 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vsx1Q91V10 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Vsx1Q91V10 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vsx1Q91V10 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vsx1Q91V10 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vsx1Q91V10 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Vsx1Q91V10 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Vsx1Q91V10 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Vsx1Q91V10 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.58■□□□□ 0.24
Vsx1Q91V10 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vsx1Q91V10 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.58■□□□□ 0.24
Vsx1Q91V10 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vsx1Q91V10 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vsx1Q91V10 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vsx1Q91V10 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vsx1Q91V10 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Vsx1Q91V10 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vsx1Q91V10 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Vsx1Q91V10 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Vsx1Q91V10 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vsx1Q91V10 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Vsx1Q91V10 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Vsx1Q91V10 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vsx1Q91V10 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vsx1Q91V10 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vsx1Q91V10 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vsx1Q91V10 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vsx1Q91V10 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vsx1Q91V10 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Vsx1Q91V10 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.57■□□□□ 0.24
Vsx1Q91V10 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vsx1Q91V10 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Vsx1Q91V10 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Vsx1Q91V10 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vsx1Q91V10 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vsx1Q91V10 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Vsx1Q91V10 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Vsx1Q91V10 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vsx1Q91V10 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Vsx1Q91V10 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vsx1Q91V10 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vsx1Q91V10 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vsx1Q91V10 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Vsx1Q91V10 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vsx1Q91V10 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vsx1Q91V10 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Vsx1Q91V10 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vsx1Q91V10 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Vsx1Q91V10 Gm15372-201ENSMUST00000120729 834 ntBASIC16.56■□□□□ 0.24
Vsx1Q91V10 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.56■□□□□ 0.24
Vsx1Q91V10 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.56■□□□□ 0.24
Vsx1Q91V10 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.56■□□□□ 0.24
Vsx1Q91V10 Rps4l-201ENSMUST00000071745 943 ntBASIC16.56■□□□□ 0.24
Vsx1Q91V10 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Vsx1Q91V10 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vsx1Q91V10 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vsx1Q91V10 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vsx1Q91V10 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Vsx1Q91V10 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Vsx1Q91V10 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.56■□□□□ 0.24
Vsx1Q91V10 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Vsx1Q91V10 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms