Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdhb11Q91UZ8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhb11Q91UZ8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb11Q91UZ8 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhb11Q91UZ8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb11Q91UZ8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Pcdhb11Q91UZ8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb11Q91UZ8 Mir5130-201ENSMUST00000175160 84 ntBASIC17.23■□□□□ 0.35
Pcdhb11Q91UZ8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Pcdhb11Q91UZ8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb11Q91UZ8 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.23■□□□□ 0.35
Pcdhb11Q91UZ8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb11Q91UZ8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb11Q91UZ8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdhb11Q91UZ8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb11Q91UZ8 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb11Q91UZ8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Pcdhb11Q91UZ8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhb11Q91UZ8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdhb11Q91UZ8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.22■□□□□ 0.35
Pcdhb11Q91UZ8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.22■□□□□ 0.35
Pcdhb11Q91UZ8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.22■□□□□ 0.35
Pcdhb11Q91UZ8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.22■□□□□ 0.35
Pcdhb11Q91UZ8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb11Q91UZ8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdhb11Q91UZ8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdhb11Q91UZ8 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdhb11Q91UZ8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.21■□□□□ 0.35
Pcdhb11Q91UZ8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdhb11Q91UZ8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.2■□□□□ 0.34
Pcdhb11Q91UZ8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb11Q91UZ8 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb11Q91UZ8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb11Q91UZ8 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb11Q91UZ8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb11Q91UZ8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb11Q91UZ8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb11Q91UZ8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Pcdhb11Q91UZ8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdhb11Q91UZ8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb11Q91UZ8 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb11Q91UZ8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb11Q91UZ8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb11Q91UZ8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdhb11Q91UZ8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb11Q91UZ8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb11Q91UZ8 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb11Q91UZ8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb11Q91UZ8 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.19■□□□□ 0.34
Pcdhb11Q91UZ8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb11Q91UZ8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb11Q91UZ8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb11Q91UZ8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb11Q91UZ8 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb11Q91UZ8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb11Q91UZ8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb11Q91UZ8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb11Q91UZ8 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pcdhb11Q91UZ8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb11Q91UZ8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.19■□□□□ 0.34
Pcdhb11Q91UZ8 Mir7071-201ENSMUST00000184847 69 ntBASIC17.19■□□□□ 0.34
Pcdhb11Q91UZ8 Gm7213-201ENSMUST00000215977 950 ntBASIC17.19■□□□□ 0.34
Pcdhb11Q91UZ8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb11Q91UZ8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb11Q91UZ8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhb11Q91UZ8 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhb11Q91UZ8 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.19■□□□□ 0.34
Pcdhb11Q91UZ8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb11Q91UZ8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb11Q91UZ8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcdhb11Q91UZ8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb11Q91UZ8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb11Q91UZ8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pcdhb11Q91UZ8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb11Q91UZ8 Actl10-202ENSMUST00000226583 1501 ntBASIC17.18■□□□□ 0.34
Pcdhb11Q91UZ8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb11Q91UZ8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms