Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
StrcQ8VIM6 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
StrcQ8VIM6 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.06■□□□□ 0.8
StrcQ8VIM6 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.06■□□□□ 0.8
StrcQ8VIM6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC20.06■□□□□ 0.8
StrcQ8VIM6 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
StrcQ8VIM6 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.06■□□□□ 0.8
StrcQ8VIM6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
StrcQ8VIM6 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
StrcQ8VIM6 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
StrcQ8VIM6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
StrcQ8VIM6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
StrcQ8VIM6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.06■□□□□ 0.8
StrcQ8VIM6 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
StrcQ8VIM6 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
StrcQ8VIM6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
StrcQ8VIM6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
StrcQ8VIM6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
StrcQ8VIM6 Gm7222-201ENSMUST00000117512 906 ntBASIC20.06■□□□□ 0.8
StrcQ8VIM6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC20.06■□□□□ 0.8
StrcQ8VIM6 Gm44945-201ENSMUST00000206764 1187 ntBASIC20.06■□□□□ 0.8
StrcQ8VIM6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC20.06■□□□□ 0.8
StrcQ8VIM6 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
StrcQ8VIM6 Gm5837-201ENSMUST00000191844 1369 ntBASIC20.06■□□□□ 0.8
StrcQ8VIM6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
StrcQ8VIM6 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.05■□□□□ 0.8
StrcQ8VIM6 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
StrcQ8VIM6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
StrcQ8VIM6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
StrcQ8VIM6 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.05■□□□□ 0.8
StrcQ8VIM6 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC20.05■□□□□ 0.8
StrcQ8VIM6 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC20.05■□□□□ 0.8
StrcQ8VIM6 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC20.05■□□□□ 0.8
StrcQ8VIM6 AC124549.3-201ENSMUST00000225541 367 ntBASIC20.05■□□□□ 0.8
StrcQ8VIM6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
StrcQ8VIM6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
StrcQ8VIM6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
StrcQ8VIM6 Gm26308-201ENSMUST00000157768 69 ntBASIC20.04■□□□□ 0.8
StrcQ8VIM6 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
StrcQ8VIM6 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
StrcQ8VIM6 AC159114.1-201ENSMUST00000220349 266 ntBASIC20.04■□□□□ 0.8
StrcQ8VIM6 AC158982.1-201ENSMUST00000228377 901 ntBASIC20.04■□□□□ 0.8
StrcQ8VIM6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
StrcQ8VIM6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
StrcQ8VIM6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
StrcQ8VIM6 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.04■□□□□ 0.8
StrcQ8VIM6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
StrcQ8VIM6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.04■□□□□ 0.8
StrcQ8VIM6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.04■□□□□ 0.8
StrcQ8VIM6 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
StrcQ8VIM6 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
StrcQ8VIM6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
StrcQ8VIM6 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
StrcQ8VIM6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
StrcQ8VIM6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
StrcQ8VIM6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
StrcQ8VIM6 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC20.03■□□□□ 0.8
StrcQ8VIM6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC20.03■□□□□ 0.8
StrcQ8VIM6 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
StrcQ8VIM6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
StrcQ8VIM6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
StrcQ8VIM6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
StrcQ8VIM6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
StrcQ8VIM6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
StrcQ8VIM6 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
StrcQ8VIM6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
StrcQ8VIM6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
StrcQ8VIM6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
StrcQ8VIM6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
StrcQ8VIM6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
StrcQ8VIM6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
StrcQ8VIM6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
StrcQ8VIM6 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
StrcQ8VIM6 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.02■□□□□ 0.8
StrcQ8VIM6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
StrcQ8VIM6 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC20.02■□□□□ 0.79
StrcQ8VIM6 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC20.02■□□□□ 0.79
StrcQ8VIM6 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
StrcQ8VIM6 Gm27646-201ENSMUST00000183989 110 ntBASIC20.02■□□□□ 0.79
StrcQ8VIM6 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC20.02■□□□□ 0.79
StrcQ8VIM6 Gm9172-201ENSMUST00000212092 954 ntBASIC20.02■□□□□ 0.79
StrcQ8VIM6 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
StrcQ8VIM6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
StrcQ8VIM6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
StrcQ8VIM6 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.02■□□□□ 0.79
StrcQ8VIM6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
StrcQ8VIM6 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
StrcQ8VIM6 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.01■□□□□ 0.79
StrcQ8VIM6 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
StrcQ8VIM6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
StrcQ8VIM6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
StrcQ8VIM6 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
StrcQ8VIM6 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
StrcQ8VIM6 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.01■□□□□ 0.79
StrcQ8VIM6 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
StrcQ8VIM6 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
StrcQ8VIM6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
StrcQ8VIM6 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
StrcQ8VIM6 Mir8117-201ENSMUST00000184773 107 ntBASIC20.01■□□□□ 0.79
StrcQ8VIM6 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms