Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc6a20aQ8VDB9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Slc6a20aQ8VDB9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Slc6a20aQ8VDB9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Slc6a20aQ8VDB9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc6a20aQ8VDB9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc6a20aQ8VDB9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc6a20aQ8VDB9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Slc6a20aQ8VDB9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a20aQ8VDB9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.58■□□□□ 0.24
Slc6a20aQ8VDB9 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.58■□□□□ 0.24
Slc6a20aQ8VDB9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a20aQ8VDB9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a20aQ8VDB9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.58■□□□□ 0.24
Slc6a20aQ8VDB9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.58■□□□□ 0.24
Slc6a20aQ8VDB9 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a20aQ8VDB9 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
Slc6a20aQ8VDB9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a20aQ8VDB9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Slc6a20aQ8VDB9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a20aQ8VDB9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.58■□□□□ 0.24
Slc6a20aQ8VDB9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a20aQ8VDB9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a20aQ8VDB9 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Slc6a20aQ8VDB9 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a20aQ8VDB9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a20aQ8VDB9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a20aQ8VDB9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a20aQ8VDB9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a20aQ8VDB9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc6a20aQ8VDB9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a20aQ8VDB9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Slc6a20aQ8VDB9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Slc6a20aQ8VDB9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Slc6a20aQ8VDB9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a20aQ8VDB9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a20aQ8VDB9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.57■□□□□ 0.24
Slc6a20aQ8VDB9 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a20aQ8VDB9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.57■□□□□ 0.24
Slc6a20aQ8VDB9 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a20aQ8VDB9 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a20aQ8VDB9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a20aQ8VDB9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a20aQ8VDB9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a20aQ8VDB9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a20aQ8VDB9 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a20aQ8VDB9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a20aQ8VDB9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Slc6a20aQ8VDB9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a20aQ8VDB9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a20aQ8VDB9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc6a20aQ8VDB9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Slc6a20aQ8VDB9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a20aQ8VDB9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a20aQ8VDB9 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.55■□□□□ 0.24
Slc6a20aQ8VDB9 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.55■□□□□ 0.24
Slc6a20aQ8VDB9 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a20aQ8VDB9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Slc6a20aQ8VDB9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a20aQ8VDB9 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.55■□□□□ 0.24
Slc6a20aQ8VDB9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a20aQ8VDB9 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a20aQ8VDB9 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.55■□□□□ 0.24
Slc6a20aQ8VDB9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Slc6a20aQ8VDB9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a20aQ8VDB9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Slc6a20aQ8VDB9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Slc6a20aQ8VDB9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Slc6a20aQ8VDB9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.55■□□□□ 0.24
Slc6a20aQ8VDB9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.55■□□□□ 0.24
Slc6a20aQ8VDB9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Slc6a20aQ8VDB9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Slc6a20aQ8VDB9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a20aQ8VDB9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Slc6a20aQ8VDB9 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.54■□□□□ 0.24
Slc6a20aQ8VDB9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms