Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Dnajc28Q8VCE1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dnajc28Q8VCE1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Dnajc28Q8VCE1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Dnajc28Q8VCE1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Dnajc28Q8VCE1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Dnajc28Q8VCE1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.33■□□□□ 0.53
Dnajc28Q8VCE1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC18.33■□□□□ 0.53
Dnajc28Q8VCE1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Dnajc28Q8VCE1 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.33■□□□□ 0.52
Dnajc28Q8VCE1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.33■□□□□ 0.52
Dnajc28Q8VCE1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Dnajc28Q8VCE1 Gm18958-201ENSMUST00000174258 762 ntBASIC18.33■□□□□ 0.52
Dnajc28Q8VCE1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.33■□□□□ 0.52
Dnajc28Q8VCE1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Dnajc28Q8VCE1 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Dnajc28Q8VCE1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Dnajc28Q8VCE1 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Dnajc28Q8VCE1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Dnajc28Q8VCE1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Dnajc28Q8VCE1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Dnajc28Q8VCE1 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Dnajc28Q8VCE1 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Dnajc28Q8VCE1 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.33■□□□□ 0.52
Dnajc28Q8VCE1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Dnajc28Q8VCE1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Dnajc28Q8VCE1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Dnajc28Q8VCE1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.32■□□□□ 0.52
Dnajc28Q8VCE1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Dnajc28Q8VCE1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Dnajc28Q8VCE1 Gm6623-201ENSMUST00000173570 544 ntBASIC18.32■□□□□ 0.52
Dnajc28Q8VCE1 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Dnajc28Q8VCE1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Dnajc28Q8VCE1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Dnajc28Q8VCE1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Dnajc28Q8VCE1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Dnajc28Q8VCE1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC18.32■□□□□ 0.52
Dnajc28Q8VCE1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Dnajc28Q8VCE1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Dnajc28Q8VCE1 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Dnajc28Q8VCE1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Dnajc28Q8VCE1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Dnajc28Q8VCE1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dnajc28Q8VCE1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dnajc28Q8VCE1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dnajc28Q8VCE1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dnajc28Q8VCE1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dnajc28Q8VCE1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Dnajc28Q8VCE1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Dnajc28Q8VCE1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Dnajc28Q8VCE1 Actl10-202ENSMUST00000226583 1501 ntBASIC18.3■□□□□ 0.52
Dnajc28Q8VCE1 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dnajc28Q8VCE1 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dnajc28Q8VCE1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.3■□□□□ 0.52
Dnajc28Q8VCE1 Gm18669-201ENSMUST00000216049 778 ntBASIC18.3■□□□□ 0.52
Dnajc28Q8VCE1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC18.3■□□□□ 0.52
Dnajc28Q8VCE1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Dnajc28Q8VCE1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.3■□□□□ 0.52
Dnajc28Q8VCE1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Dnajc28Q8VCE1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.29■□□□□ 0.52
Dnajc28Q8VCE1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dnajc28Q8VCE1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dnajc28Q8VCE1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
Dnajc28Q8VCE1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.29■□□□□ 0.52
Dnajc28Q8VCE1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dnajc28Q8VCE1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Dnajc28Q8VCE1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.29■□□□□ 0.52
Dnajc28Q8VCE1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dnajc28Q8VCE1 Mir770-201ENSMUST00000103252 94 ntBASIC18.29■□□□□ 0.52
Dnajc28Q8VCE1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Dnajc28Q8VCE1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Dnajc28Q8VCE1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dnajc28Q8VCE1 Gm7461-201ENSMUST00000058918 827 ntBASIC18.29■□□□□ 0.52
Dnajc28Q8VCE1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dnajc28Q8VCE1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms