Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3kbp1Q8R550 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3kbp1Q8R550 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3kbp1Q8R550 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3kbp1Q8R550 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3kbp1Q8R550 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3kbp1Q8R550 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3kbp1Q8R550 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.34■□□□□ 0.37
Sh3kbp1Q8R550 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sh3kbp1Q8R550 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3kbp1Q8R550 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3kbp1Q8R550 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Sh3kbp1Q8R550 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.34■□□□□ 0.37
Sh3kbp1Q8R550 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3kbp1Q8R550 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3kbp1Q8R550 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sh3kbp1Q8R550 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh3kbp1Q8R550 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh3kbp1Q8R550 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh3kbp1Q8R550 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Sh3kbp1Q8R550 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh3kbp1Q8R550 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sh3kbp1Q8R550 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3kbp1Q8R550 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Sh3kbp1Q8R550 Gm13474-201ENSMUST00000122466 815 ntBASIC17.33■□□□□ 0.36
Sh3kbp1Q8R550 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3kbp1Q8R550 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3kbp1Q8R550 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3kbp1Q8R550 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3kbp1Q8R550 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3kbp1Q8R550 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3kbp1Q8R550 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3kbp1Q8R550 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3kbp1Q8R550 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3kbp1Q8R550 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3kbp1Q8R550 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3kbp1Q8R550 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Sh3kbp1Q8R550 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.33■□□□□ 0.36
Sh3kbp1Q8R550 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3kbp1Q8R550 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.33■□□□□ 0.36
Sh3kbp1Q8R550 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3kbp1Q8R550 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sh3kbp1Q8R550 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3kbp1Q8R550 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3kbp1Q8R550 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3kbp1Q8R550 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3kbp1Q8R550 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.32■□□□□ 0.36
Sh3kbp1Q8R550 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3kbp1Q8R550 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3kbp1Q8R550 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.32■□□□□ 0.36
Sh3kbp1Q8R550 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3kbp1Q8R550 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3kbp1Q8R550 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3kbp1Q8R550 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.32■□□□□ 0.36
Sh3kbp1Q8R550 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3kbp1Q8R550 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Sh3kbp1Q8R550 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3kbp1Q8R550 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3kbp1Q8R550 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3kbp1Q8R550 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3kbp1Q8R550 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Sh3kbp1Q8R550 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3kbp1Q8R550 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3kbp1Q8R550 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.32■□□□□ 0.36
Sh3kbp1Q8R550 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sh3kbp1Q8R550 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3kbp1Q8R550 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3kbp1Q8R550 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3kbp1Q8R550 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3kbp1Q8R550 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3kbp1Q8R550 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3kbp1Q8R550 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3kbp1Q8R550 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3kbp1Q8R550 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.31■□□□□ 0.36
Sh3kbp1Q8R550 Gm17661-201ENSMUST00000170317 270 ntBASIC17.31■□□□□ 0.36
Sh3kbp1Q8R550 Gm9731-201ENSMUST00000209480 747 ntBASIC17.31■□□□□ 0.36
Sh3kbp1Q8R550 Gm21559-201ENSMUST00000220638 855 ntBASIC17.31■□□□□ 0.36
Sh3kbp1Q8R550 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3kbp1Q8R550 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3kbp1Q8R550 Gm8587-201ENSMUST00000076538 843 ntBASIC17.31■□□□□ 0.36
Sh3kbp1Q8R550 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3kbp1Q8R550 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Sh3kbp1Q8R550 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3kbp1Q8R550 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Sh3kbp1Q8R550 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Sh3kbp1Q8R550 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Sh3kbp1Q8R550 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3kbp1Q8R550 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3kbp1Q8R550 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.3■□□□□ 0.36
Sh3kbp1Q8R550 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3kbp1Q8R550 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3kbp1Q8R550 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3kbp1Q8R550 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3kbp1Q8R550 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.3■□□□□ 0.36
Sh3kbp1Q8R550 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.3■□□□□ 0.36
Sh3kbp1Q8R550 Ank2-226ENSMUST00000189368 339 ntBASIC17.3■□□□□ 0.36
Sh3kbp1Q8R550 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3kbp1Q8R550 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
Sh3kbp1Q8R550 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3kbp1Q8R550 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms