Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nup58Q8R332 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nup58Q8R332 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nup58Q8R332 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nup58Q8R332 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Nup58Q8R332 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18■□□□□ 0.47
Nup58Q8R332 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18■□□□□ 0.47
Nup58Q8R332 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nup58Q8R332 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nup58Q8R332 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Nup58Q8R332 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nup58Q8R332 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18■□□□□ 0.47
Nup58Q8R332 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Nup58Q8R332 Mir1199-201ENSMUST00000117015 119 ntBASIC18■□□□□ 0.47
Nup58Q8R332 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18■□□□□ 0.47
Nup58Q8R332 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Nup58Q8R332 AC107711.5-202ENSMUST00000226429 702 ntBASIC18■□□□□ 0.47
Nup58Q8R332 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nup58Q8R332 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18■□□□□ 0.47
Nup58Q8R332 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Nup58Q8R332 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Nup58Q8R332 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Nup58Q8R332 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Nup58Q8R332 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nup58Q8R332 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nup58Q8R332 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nup58Q8R332 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nup58Q8R332 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nup58Q8R332 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.99■□□□□ 0.47
Nup58Q8R332 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nup58Q8R332 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nup58Q8R332 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nup58Q8R332 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nup58Q8R332 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nup58Q8R332 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nup58Q8R332 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Nup58Q8R332 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.99■□□□□ 0.47
Nup58Q8R332 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nup58Q8R332 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nup58Q8R332 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.99■□□□□ 0.47
Nup58Q8R332 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.99■□□□□ 0.47
Nup58Q8R332 Gm18025-201ENSMUST00000221733 862 ntBASIC17.99■□□□□ 0.47
Nup58Q8R332 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nup58Q8R332 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Nup58Q8R332 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nup58Q8R332 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nup58Q8R332 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nup58Q8R332 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nup58Q8R332 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nup58Q8R332 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nup58Q8R332 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.98■□□□□ 0.47
Nup58Q8R332 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup58Q8R332 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup58Q8R332 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Nup58Q8R332 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nup58Q8R332 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Nup58Q8R332 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nup58Q8R332 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup58Q8R332 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup58Q8R332 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.98■□□□□ 0.47
Nup58Q8R332 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup58Q8R332 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
Nup58Q8R332 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.98■□□□□ 0.47
Nup58Q8R332 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.98■□□□□ 0.47
Nup58Q8R332 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nup58Q8R332 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup58Q8R332 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup58Q8R332 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nup58Q8R332 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nup58Q8R332 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
Nup58Q8R332 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup58Q8R332 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup58Q8R332 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nup58Q8R332 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nup58Q8R332 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.98■□□□□ 0.47
Nup58Q8R332 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup58Q8R332 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nup58Q8R332 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup58Q8R332 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup58Q8R332 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup58Q8R332 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup58Q8R332 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.97■□□□□ 0.47
Nup58Q8R332 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup58Q8R332 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup58Q8R332 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nup58Q8R332 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Nup58Q8R332 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nup58Q8R332 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.97■□□□□ 0.47
Nup58Q8R332 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Nup58Q8R332 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup58Q8R332 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup58Q8R332 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup58Q8R332 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup58Q8R332 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.96■□□□□ 0.47
Nup58Q8R332 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup58Q8R332 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup58Q8R332 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup58Q8R332 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup58Q8R332 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nup58Q8R332 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms