Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Chmp7Q8R1T1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chmp7Q8R1T1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chmp7Q8R1T1 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chmp7Q8R1T1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC21.48■■□□□ 1.03
Chmp7Q8R1T1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chmp7Q8R1T1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Chmp7Q8R1T1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chmp7Q8R1T1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chmp7Q8R1T1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chmp7Q8R1T1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chmp7Q8R1T1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC21.48■■□□□ 1.03
Chmp7Q8R1T1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Chmp7Q8R1T1 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Chmp7Q8R1T1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Chmp7Q8R1T1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Chmp7Q8R1T1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Chmp7Q8R1T1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Chmp7Q8R1T1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chmp7Q8R1T1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Chmp7Q8R1T1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Chmp7Q8R1T1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC21.47■■□□□ 1.03
Chmp7Q8R1T1 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chmp7Q8R1T1 Gm13312-201ENSMUST00000119631 718 ntBASIC21.47■■□□□ 1.03
Chmp7Q8R1T1 Gm11452-201ENSMUST00000122376 690 ntBASIC21.47■■□□□ 1.03
Chmp7Q8R1T1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC21.47■■□□□ 1.03
Chmp7Q8R1T1 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC21.47■■□□□ 1.03
Chmp7Q8R1T1 Rprl3-201ENSMUST00000157400 290 ntBASIC21.47■■□□□ 1.03
Chmp7Q8R1T1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chmp7Q8R1T1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Chmp7Q8R1T1 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chmp7Q8R1T1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Chmp7Q8R1T1 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chmp7Q8R1T1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Chmp7Q8R1T1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chmp7Q8R1T1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chmp7Q8R1T1 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chmp7Q8R1T1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Chmp7Q8R1T1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chmp7Q8R1T1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Chmp7Q8R1T1 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC21.46■■□□□ 1.03
Chmp7Q8R1T1 Gm12644-201ENSMUST00000119935 606 ntBASIC21.46■■□□□ 1.03
Chmp7Q8R1T1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chmp7Q8R1T1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC21.46■■□□□ 1.03
Chmp7Q8R1T1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chmp7Q8R1T1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chmp7Q8R1T1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chmp7Q8R1T1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chmp7Q8R1T1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chmp7Q8R1T1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Chmp7Q8R1T1 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
Chmp7Q8R1T1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chmp7Q8R1T1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Chmp7Q8R1T1 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chmp7Q8R1T1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chmp7Q8R1T1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chmp7Q8R1T1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chmp7Q8R1T1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Chmp7Q8R1T1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Chmp7Q8R1T1 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Chmp7Q8R1T1 Gfra2-202ENSMUST00000227633 1480 ntBASIC21.45■■□□□ 1.02
Chmp7Q8R1T1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chmp7Q8R1T1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chmp7Q8R1T1 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Chmp7Q8R1T1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Chmp7Q8R1T1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chmp7Q8R1T1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chmp7Q8R1T1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chmp7Q8R1T1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC21.44■■□□□ 1.02
Chmp7Q8R1T1 Dmtn-207ENSMUST00000228001 2437 ntBASIC21.44■■□□□ 1.02
Chmp7Q8R1T1 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Chmp7Q8R1T1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chmp7Q8R1T1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC21.44■■□□□ 1.02
Chmp7Q8R1T1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC21.44■■□□□ 1.02
Chmp7Q8R1T1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Chmp7Q8R1T1 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.44■■□□□ 1.02
Chmp7Q8R1T1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Chmp7Q8R1T1 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Chmp7Q8R1T1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 Gm43514-201ENSMUST00000198852 424 ntBASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 Gm6443-201ENSMUST00000203599 874 ntBASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Chmp7Q8R1T1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms