Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Zcchc9Q8R1J3 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.77■□□□□ 0.27
Zcchc9Q8R1J3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Zcchc9Q8R1J3 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Zcchc9Q8R1J3 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Zcchc9Q8R1J3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Zcchc9Q8R1J3 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Zcchc9Q8R1J3 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Zcchc9Q8R1J3 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Zcchc9Q8R1J3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Zcchc9Q8R1J3 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Zcchc9Q8R1J3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Zcchc9Q8R1J3 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Zcchc9Q8R1J3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Zcchc9Q8R1J3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Zcchc9Q8R1J3 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Zcchc9Q8R1J3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Zcchc9Q8R1J3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Zcchc9Q8R1J3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Zcchc9Q8R1J3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Zcchc9Q8R1J3 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Zcchc9Q8R1J3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Zcchc9Q8R1J3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Zcchc9Q8R1J3 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Zcchc9Q8R1J3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Zcchc9Q8R1J3 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.75■□□□□ 0.27
Zcchc9Q8R1J3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.75■□□□□ 0.27
Zcchc9Q8R1J3 Gm37722-201ENSMUST00000193757 208 ntBASIC16.75■□□□□ 0.27
Zcchc9Q8R1J3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Zcchc9Q8R1J3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Zcchc9Q8R1J3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.75■□□□□ 0.27
Zcchc9Q8R1J3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Zcchc9Q8R1J3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Zcchc9Q8R1J3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Zcchc9Q8R1J3 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 Mir770-201ENSMUST00000103252 94 ntBASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Zcchc9Q8R1J3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Actl10-202ENSMUST00000226583 1501 ntBASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Haglr-201ENSMUST00000100000 2085 ntBASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Zcchc9Q8R1J3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zcchc9Q8R1J3 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zcchc9Q8R1J3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Zcchc9Q8R1J3 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zcchc9Q8R1J3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zcchc9Q8R1J3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zcchc9Q8R1J3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Zcchc9Q8R1J3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Zcchc9Q8R1J3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Zcchc9Q8R1J3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Zcchc9Q8R1J3 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.72■□□□□ 0.27
Zcchc9Q8R1J3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.72■□□□□ 0.27
Zcchc9Q8R1J3 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Zcchc9Q8R1J3 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms