Protein–RNA interactions for Protein: Q8K299

Scara5, Scavenger receptor class A member 5, mousemouse

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scara5Q8K299 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scara5Q8K299 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scara5Q8K299 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.79■□□□□ 0.28
Scara5Q8K299 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scara5Q8K299 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.79■□□□□ 0.28
Scara5Q8K299 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scara5Q8K299 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scara5Q8K299 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scara5Q8K299 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scara5Q8K299 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scara5Q8K299 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scara5Q8K299 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scara5Q8K299 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Scara5Q8K299 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scara5Q8K299 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scara5Q8K299 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Scara5Q8K299 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scara5Q8K299 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scara5Q8K299 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.78■□□□□ 0.28
Scara5Q8K299 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Scara5Q8K299 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scara5Q8K299 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scara5Q8K299 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.78■□□□□ 0.28
Scara5Q8K299 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Scara5Q8K299 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.78■□□□□ 0.28
Scara5Q8K299 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Scara5Q8K299 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Scara5Q8K299 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Scara5Q8K299 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scara5Q8K299 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scara5Q8K299 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.78■□□□□ 0.28
Scara5Q8K299 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scara5Q8K299 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.78■□□□□ 0.28
Scara5Q8K299 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.78■□□□□ 0.28
Scara5Q8K299 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scara5Q8K299 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scara5Q8K299 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scara5Q8K299 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scara5Q8K299 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scara5Q8K299 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scara5Q8K299 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.77■□□□□ 0.28
Scara5Q8K299 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.77■□□□□ 0.28
Scara5Q8K299 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scara5Q8K299 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scara5Q8K299 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.77■□□□□ 0.28
Scara5Q8K299 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scara5Q8K299 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scara5Q8K299 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scara5Q8K299 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scara5Q8K299 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.27
Scara5Q8K299 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scara5Q8K299 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scara5Q8K299 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scara5Q8K299 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scara5Q8K299 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Scara5Q8K299 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scara5Q8K299 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scara5Q8K299 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scara5Q8K299 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Scara5Q8K299 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.76■□□□□ 0.27
Scara5Q8K299 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Scara5Q8K299 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scara5Q8K299 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Scara5Q8K299 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Scara5Q8K299 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scara5Q8K299 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.76■□□□□ 0.27
Scara5Q8K299 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.76■□□□□ 0.27
Scara5Q8K299 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.76■□□□□ 0.27
Scara5Q8K299 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.76■□□□□ 0.27
Scara5Q8K299 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Scara5Q8K299 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scara5Q8K299 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scara5Q8K299 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.76■□□□□ 0.27
Scara5Q8K299 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.76■□□□□ 0.27
Scara5Q8K299 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scara5Q8K299 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scara5Q8K299 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scara5Q8K299 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scara5Q8K299 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scara5Q8K299 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scara5Q8K299 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scara5Q8K299 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.75■□□□□ 0.27
Scara5Q8K299 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scara5Q8K299 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scara5Q8K299 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scara5Q8K299 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scara5Q8K299 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scara5Q8K299 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Scara5Q8K299 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.75■□□□□ 0.27
Scara5Q8K299 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scara5Q8K299 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.75■□□□□ 0.27
Scara5Q8K299 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.75■□□□□ 0.27
Scara5Q8K299 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Scara5Q8K299 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.75■□□□□ 0.27
Scara5Q8K299 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Scara5Q8K299 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scara5Q8K299 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scara5Q8K299 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.75■□□□□ 0.27
Scara5Q8K299 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Scara5Q8K299 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms