Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trpm6Q8CIR4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trpm6Q8CIR4 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trpm6Q8CIR4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trpm6Q8CIR4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trpm6Q8CIR4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trpm6Q8CIR4 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.81■□□□□ 0.28
Trpm6Q8CIR4 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trpm6Q8CIR4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trpm6Q8CIR4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trpm6Q8CIR4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trpm6Q8CIR4 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trpm6Q8CIR4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trpm6Q8CIR4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Trpm6Q8CIR4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trpm6Q8CIR4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trpm6Q8CIR4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trpm6Q8CIR4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trpm6Q8CIR4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trpm6Q8CIR4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trpm6Q8CIR4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.81■□□□□ 0.28
Trpm6Q8CIR4 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trpm6Q8CIR4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trpm6Q8CIR4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.8■□□□□ 0.28
Trpm6Q8CIR4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trpm6Q8CIR4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trpm6Q8CIR4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trpm6Q8CIR4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trpm6Q8CIR4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trpm6Q8CIR4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trpm6Q8CIR4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Trpm6Q8CIR4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
Trpm6Q8CIR4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.8■□□□□ 0.28
Trpm6Q8CIR4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.8■□□□□ 0.28
Trpm6Q8CIR4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trpm6Q8CIR4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trpm6Q8CIR4 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trpm6Q8CIR4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trpm6Q8CIR4 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.8■□□□□ 0.28
Trpm6Q8CIR4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trpm6Q8CIR4 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trpm6Q8CIR4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trpm6Q8CIR4 Gm11452-201ENSMUST00000122376 690 ntBASIC16.79■□□□□ 0.28
Trpm6Q8CIR4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trpm6Q8CIR4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.79■□□□□ 0.28
Trpm6Q8CIR4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trpm6Q8CIR4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.79■□□□□ 0.28
Trpm6Q8CIR4 Rps4l-201ENSMUST00000071745 943 ntBASIC16.79■□□□□ 0.28
Trpm6Q8CIR4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trpm6Q8CIR4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trpm6Q8CIR4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trpm6Q8CIR4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trpm6Q8CIR4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.79■□□□□ 0.28
Trpm6Q8CIR4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trpm6Q8CIR4 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trpm6Q8CIR4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.79■□□□□ 0.28
Trpm6Q8CIR4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trpm6Q8CIR4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trpm6Q8CIR4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.79■□□□□ 0.28
Trpm6Q8CIR4 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trpm6Q8CIR4 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.79■□□□□ 0.28
Trpm6Q8CIR4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trpm6Q8CIR4 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trpm6Q8CIR4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trpm6Q8CIR4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Trpm6Q8CIR4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.78■□□□□ 0.28
Trpm6Q8CIR4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.78■□□□□ 0.28
Trpm6Q8CIR4 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trpm6Q8CIR4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trpm6Q8CIR4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trpm6Q8CIR4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
Trpm6Q8CIR4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trpm6Q8CIR4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trpm6Q8CIR4 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trpm6Q8CIR4 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trpm6Q8CIR4 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trpm6Q8CIR4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms