Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rfwd3Q8CIK8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rfwd3Q8CIK8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfwd3Q8CIK8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfwd3Q8CIK8 Gm6433-201ENSMUST00000118634 875 ntBASIC15.83■□□□□ 0.12
Rfwd3Q8CIK8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rfwd3Q8CIK8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Rfwd3Q8CIK8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfwd3Q8CIK8 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfwd3Q8CIK8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rfwd3Q8CIK8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfwd3Q8CIK8 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.83■□□□□ 0.12
Rfwd3Q8CIK8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rfwd3Q8CIK8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rfwd3Q8CIK8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfwd3Q8CIK8 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.83■□□□□ 0.12
Rfwd3Q8CIK8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfwd3Q8CIK8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfwd3Q8CIK8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Rfwd3Q8CIK8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rfwd3Q8CIK8 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfwd3Q8CIK8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rfwd3Q8CIK8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rfwd3Q8CIK8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.82■□□□□ 0.12
Rfwd3Q8CIK8 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfwd3Q8CIK8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rfwd3Q8CIK8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfwd3Q8CIK8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rfwd3Q8CIK8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.81■□□□□ 0.12
Rfwd3Q8CIK8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfwd3Q8CIK8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfwd3Q8CIK8 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.81■□□□□ 0.12
Rfwd3Q8CIK8 Gm2274-201ENSMUST00000184539 609 ntBASIC15.81■□□□□ 0.12
Rfwd3Q8CIK8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Rfwd3Q8CIK8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfwd3Q8CIK8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Rfwd3Q8CIK8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfwd3Q8CIK8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfwd3Q8CIK8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfwd3Q8CIK8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Rfwd3Q8CIK8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfwd3Q8CIK8 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rfwd3Q8CIK8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Rfwd3Q8CIK8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfwd3Q8CIK8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfwd3Q8CIK8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfwd3Q8CIK8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
Rfwd3Q8CIK8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rfwd3Q8CIK8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rfwd3Q8CIK8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfwd3Q8CIK8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfwd3Q8CIK8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfwd3Q8CIK8 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rfwd3Q8CIK8 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rfwd3Q8CIK8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Rfwd3Q8CIK8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.8■□□□□ 0.12
Rfwd3Q8CIK8 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.8■□□□□ 0.12
Rfwd3Q8CIK8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfwd3Q8CIK8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfwd3Q8CIK8 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.8■□□□□ 0.12
Rfwd3Q8CIK8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfwd3Q8CIK8 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfwd3Q8CIK8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rfwd3Q8CIK8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.79■□□□□ 0.12
Rfwd3Q8CIK8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfwd3Q8CIK8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rfwd3Q8CIK8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfwd3Q8CIK8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.79■□□□□ 0.12
Rfwd3Q8CIK8 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rfwd3Q8CIK8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rfwd3Q8CIK8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfwd3Q8CIK8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfwd3Q8CIK8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rfwd3Q8CIK8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rfwd3Q8CIK8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms