Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb7Q8CDY9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb7Q8CDY9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb7Q8CDY9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb7Q8CDY9 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb7Q8CDY9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb7Q8CDY9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb7Q8CDY9 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb7Q8CDY9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb7Q8CDY9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb7Q8CDY9 Gm12085-201ENSMUST00000119263 940 ntBASIC16.9■□□□□ 0.3
Pcdhb7Q8CDY9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdhb7Q8CDY9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb7Q8CDY9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb7Q8CDY9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdhb7Q8CDY9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.9■□□□□ 0.3
Pcdhb7Q8CDY9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb7Q8CDY9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb7Q8CDY9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pcdhb7Q8CDY9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Pcdhb7Q8CDY9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb7Q8CDY9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhb7Q8CDY9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb7Q8CDY9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb7Q8CDY9 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhb7Q8CDY9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Pcdhb7Q8CDY9 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb7Q8CDY9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb7Q8CDY9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.89■□□□□ 0.29
Pcdhb7Q8CDY9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.89■□□□□ 0.29
Pcdhb7Q8CDY9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb7Q8CDY9 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Pcdhb7Q8CDY9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb7Q8CDY9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb7Q8CDY9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Pcdhb7Q8CDY9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Pcdhb7Q8CDY9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Pcdhb7Q8CDY9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb7Q8CDY9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb7Q8CDY9 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Pcdhb7Q8CDY9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb7Q8CDY9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Pcdhb7Q8CDY9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhb7Q8CDY9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb7Q8CDY9 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb7Q8CDY9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb7Q8CDY9 Gm37025-201ENSMUST00000195159 829 ntBASIC16.86■□□□□ 0.29
Pcdhb7Q8CDY9 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms