Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sh3rf2Q8BZT2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3rf2Q8BZT2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sh3rf2Q8BZT2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh3rf2Q8BZT2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Sh3rf2Q8BZT2 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh3rf2Q8BZT2 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh3rf2Q8BZT2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh3rf2Q8BZT2 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh3rf2Q8BZT2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Sh3rf2Q8BZT2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Sh3rf2Q8BZT2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.03■□□□□ 0.32
Sh3rf2Q8BZT2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh3rf2Q8BZT2 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh3rf2Q8BZT2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh3rf2Q8BZT2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Sh3rf2Q8BZT2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Sh3rf2Q8BZT2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sh3rf2Q8BZT2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sh3rf2Q8BZT2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.02■□□□□ 0.32
Sh3rf2Q8BZT2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sh3rf2Q8BZT2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sh3rf2Q8BZT2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.02■□□□□ 0.32
Sh3rf2Q8BZT2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Sh3rf2Q8BZT2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sh3rf2Q8BZT2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Sh3rf2Q8BZT2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.02■□□□□ 0.32
Sh3rf2Q8BZT2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sh3rf2Q8BZT2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sh3rf2Q8BZT2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sh3rf2Q8BZT2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sh3rf2Q8BZT2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sh3rf2Q8BZT2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sh3rf2Q8BZT2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sh3rf2Q8BZT2 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sh3rf2Q8BZT2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sh3rf2Q8BZT2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Sh3rf2Q8BZT2 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.01■□□□□ 0.31
Sh3rf2Q8BZT2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3rf2Q8BZT2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3rf2Q8BZT2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3rf2Q8BZT2 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.01■□□□□ 0.31
Sh3rf2Q8BZT2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3rf2Q8BZT2 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3rf2Q8BZT2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Sh3rf2Q8BZT2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3rf2Q8BZT2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3rf2Q8BZT2 Gm18421-201ENSMUST00000204122 625 ntBASIC17.01■□□□□ 0.31
Sh3rf2Q8BZT2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.01■□□□□ 0.31
Sh3rf2Q8BZT2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Sh3rf2Q8BZT2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3rf2Q8BZT2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3rf2Q8BZT2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3rf2Q8BZT2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3rf2Q8BZT2 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.01■□□□□ 0.31
Sh3rf2Q8BZT2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3rf2Q8BZT2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.01■□□□□ 0.31
Sh3rf2Q8BZT2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sh3rf2Q8BZT2 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.01■□□□□ 0.31
Sh3rf2Q8BZT2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Sh3rf2Q8BZT2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
Sh3rf2Q8BZT2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17■□□□□ 0.31
Sh3rf2Q8BZT2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3rf2Q8BZT2 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3rf2Q8BZT2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3rf2Q8BZT2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17■□□□□ 0.31
Sh3rf2Q8BZT2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3rf2Q8BZT2 Gm7153-201ENSMUST00000117092 455 ntBASIC17■□□□□ 0.31
Sh3rf2Q8BZT2 Gm29707-201ENSMUST00000196325 491 ntBASIC17■□□□□ 0.31
Sh3rf2Q8BZT2 Gm16499-203ENSMUST00000204633 2177 ntBASIC17■□□□□ 0.31
Sh3rf2Q8BZT2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17■□□□□ 0.31
Sh3rf2Q8BZT2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3rf2Q8BZT2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3rf2Q8BZT2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3rf2Q8BZT2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3rf2Q8BZT2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17■□□□□ 0.31
Sh3rf2Q8BZT2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3rf2Q8BZT2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Sh3rf2Q8BZT2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf2Q8BZT2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf2Q8BZT2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf2Q8BZT2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf2Q8BZT2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf2Q8BZT2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf2Q8BZT2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Sh3rf2Q8BZT2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.99■□□□□ 0.31
Sh3rf2Q8BZT2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Sh3rf2Q8BZT2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Sh3rf2Q8BZT2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf2Q8BZT2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf2Q8BZT2 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Sh3rf2Q8BZT2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms