Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chd9Q8BYH8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chd9Q8BYH8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd9Q8BYH8 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Chd9Q8BYH8 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd9Q8BYH8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Chd9Q8BYH8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chd9Q8BYH8 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chd9Q8BYH8 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.23□□□□□ -0.29
Chd9Q8BYH8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chd9Q8BYH8 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.23□□□□□ -0.29
Chd9Q8BYH8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC13.23□□□□□ -0.29
Chd9Q8BYH8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd9Q8BYH8 Gm18187-201ENSMUST00000196476 984 ntBASIC13.23□□□□□ -0.29
Chd9Q8BYH8 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.23□□□□□ -0.29
Chd9Q8BYH8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chd9Q8BYH8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd9Q8BYH8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd9Q8BYH8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd9Q8BYH8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chd9Q8BYH8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Gm7856-201ENSMUST00000117514 1493 ntBASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Gm2423-201ENSMUST00000074863 733 ntBASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Gm6550-201ENSMUST00000187574 993 ntBASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chd9Q8BYH8 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.22□□□□□ -0.29
Chd9Q8BYH8 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.22□□□□□ -0.29
Chd9Q8BYH8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd9Q8BYH8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.21□□□□□ -0.29
Chd9Q8BYH8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
Chd9Q8BYH8 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd9Q8BYH8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chd9Q8BYH8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd9Q8BYH8 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.21□□□□□ -0.29
Chd9Q8BYH8 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd9Q8BYH8 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Chd9Q8BYH8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd9Q8BYH8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd9Q8BYH8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd9Q8BYH8 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd9Q8BYH8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.21□□□□□ -0.29
Chd9Q8BYH8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Chd9Q8BYH8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Chd9Q8BYH8 Rarb-207ENSMUST00000225921 2756 ntBASIC13.21□□□□□ -0.3
Chd9Q8BYH8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chd9Q8BYH8 Phf7-203ENSMUST00000226565 1971 ntBASIC13.21□□□□□ -0.3
Chd9Q8BYH8 Gm13036-201ENSMUST00000117799 748 ntBASIC13.21□□□□□ -0.3
Chd9Q8BYH8 Gm5866-201ENSMUST00000177881 973 ntBASIC13.21□□□□□ -0.3
Chd9Q8BYH8 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chd9Q8BYH8 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.21□□□□□ -0.3
Chd9Q8BYH8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chd9Q8BYH8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Chd9Q8BYH8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chd9Q8BYH8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chd9Q8BYH8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Chd9Q8BYH8 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Grk6-207ENSMUST00000225925 2769 ntBASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd9Q8BYH8 BC021767-201ENSMUST00000126387 1716 ntBASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Gm11764-201ENSMUST00000120221 623 ntBASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms