Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.29■□□□□ 0.36
Suds3Q8BR65 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Suds3Q8BR65 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Suds3Q8BR65 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.29■□□□□ 0.36
Suds3Q8BR65 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Suds3Q8BR65 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Suds3Q8BR65 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.29■□□□□ 0.36
Suds3Q8BR65 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Suds3Q8BR65 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Suds3Q8BR65 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Suds3Q8BR65 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Suds3Q8BR65 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Suds3Q8BR65 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Suds3Q8BR65 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.29■□□□□ 0.36
Suds3Q8BR65 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Suds3Q8BR65 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Suds3Q8BR65 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Suds3Q8BR65 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Suds3Q8BR65 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Suds3Q8BR65 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Suds3Q8BR65 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.28■□□□□ 0.36
Suds3Q8BR65 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Suds3Q8BR65 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Suds3Q8BR65 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Suds3Q8BR65 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Suds3Q8BR65 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Suds3Q8BR65 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Suds3Q8BR65 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Suds3Q8BR65 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.28■□□□□ 0.36
Suds3Q8BR65 Gm4974-201ENSMUST00000209974 875 ntBASIC17.28■□□□□ 0.36
Suds3Q8BR65 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.28■□□□□ 0.36
Suds3Q8BR65 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Suds3Q8BR65 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Suds3Q8BR65 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Suds3Q8BR65 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Suds3Q8BR65 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Suds3Q8BR65 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Suds3Q8BR65 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Suds3Q8BR65 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Suds3Q8BR65 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.28■□□□□ 0.36
Suds3Q8BR65 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Suds3Q8BR65 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Suds3Q8BR65 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Suds3Q8BR65 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
Suds3Q8BR65 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.27■□□□□ 0.36
Suds3Q8BR65 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Suds3Q8BR65 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Suds3Q8BR65 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Suds3Q8BR65 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Suds3Q8BR65 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.27■□□□□ 0.36
Suds3Q8BR65 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.27■□□□□ 0.36
Suds3Q8BR65 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Suds3Q8BR65 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.27■□□□□ 0.36
Suds3Q8BR65 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Suds3Q8BR65 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.27■□□□□ 0.36
Suds3Q8BR65 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Suds3Q8BR65 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Suds3Q8BR65 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Suds3Q8BR65 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Suds3Q8BR65 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
Suds3Q8BR65 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Suds3Q8BR65 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Suds3Q8BR65 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Suds3Q8BR65 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Suds3Q8BR65 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Suds3Q8BR65 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.26■□□□□ 0.35
Suds3Q8BR65 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Suds3Q8BR65 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Suds3Q8BR65 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Suds3Q8BR65 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Suds3Q8BR65 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Suds3Q8BR65 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Suds3Q8BR65 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Suds3Q8BR65 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Suds3Q8BR65 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Suds3Q8BR65 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Suds3Q8BR65 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.26■□□□□ 0.35
Suds3Q8BR65 Gm30025-201ENSMUST00000218555 728 ntBASIC17.26■□□□□ 0.35
Suds3Q8BR65 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Suds3Q8BR65 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Suds3Q8BR65 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Suds3Q8BR65 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Suds3Q8BR65 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Suds3Q8BR65 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Suds3Q8BR65 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Suds3Q8BR65 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Suds3Q8BR65 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Suds3Q8BR65 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Suds3Q8BR65 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Suds3Q8BR65 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Suds3Q8BR65 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Suds3Q8BR65 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.25■□□□□ 0.35
Suds3Q8BR65 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Suds3Q8BR65 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.25■□□□□ 0.35
Suds3Q8BR65 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.25■□□□□ 0.35
Suds3Q8BR65 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.25■□□□□ 0.35
Suds3Q8BR65 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Suds3Q8BR65 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Suds3Q8BR65 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Suds3Q8BR65 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms