Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdhr3Q8BL00 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cdhr3Q8BL00 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdhr3Q8BL00 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Cdhr3Q8BL00 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdhr3Q8BL00 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cdhr3Q8BL00 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Gm9694-201ENSMUST00000193347 1189 ntBASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Dancr-204ENSMUST00000132389 2347 ntBASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cdhr3Q8BL00 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 Gm17661-201ENSMUST00000170317 270 ntBASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 Gm43183-201ENSMUST00000200632 547 ntBASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Cdhr3Q8BL00 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 Gm18666-201ENSMUST00000190039 958 ntBASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 Gm20049-201ENSMUST00000219950 730 ntBASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Cdhr3Q8BL00 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr3Q8BL00 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr3Q8BL00 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr3Q8BL00 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Cdhr3Q8BL00 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr3Q8BL00 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cdhr3Q8BL00 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr3Q8BL00 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr3Q8BL00 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr3Q8BL00 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr3Q8BL00 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Cdhr3Q8BL00 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.67□□□□□ -0.06
Cdhr3Q8BL00 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.67□□□□□ -0.06
Cdhr3Q8BL00 AC164629.5-201ENSMUST00000220387 632 ntBASIC14.67□□□□□ -0.06
Cdhr3Q8BL00 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Cdhr3Q8BL00 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cdhr3Q8BL00 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms