Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chmp2bQ8BJF9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Gm24841-201ENSMUST00000158676 357 ntBASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Chmp2bQ8BJF9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2bQ8BJF9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2bQ8BJF9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Chmp2bQ8BJF9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2bQ8BJF9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2bQ8BJF9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2bQ8BJF9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2bQ8BJF9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2bQ8BJF9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2bQ8BJF9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.21■□□□□ 0.35
Chmp2bQ8BJF9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2bQ8BJF9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.21■□□□□ 0.35
Chmp2bQ8BJF9 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2bQ8BJF9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2bQ8BJF9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2bQ8BJF9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2bQ8BJF9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2bQ8BJF9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2bQ8BJF9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chmp2bQ8BJF9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Chmp2bQ8BJF9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Chmp2bQ8BJF9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2bQ8BJF9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2bQ8BJF9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2bQ8BJF9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2bQ8BJF9 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2bQ8BJF9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2bQ8BJF9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2bQ8BJF9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2bQ8BJF9 Gm18666-201ENSMUST00000190039 958 ntBASIC17.2■□□□□ 0.34
Chmp2bQ8BJF9 Gm43183-201ENSMUST00000200632 547 ntBASIC17.2■□□□□ 0.34
Chmp2bQ8BJF9 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Chmp2bQ8BJF9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2bQ8BJF9 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2bQ8BJF9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2bQ8BJF9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2bQ8BJF9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2bQ8BJF9 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.2■□□□□ 0.34
Chmp2bQ8BJF9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2bQ8BJF9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2bQ8BJF9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2bQ8BJF9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2bQ8BJF9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Chmp2bQ8BJF9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chmp2bQ8BJF9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Chmp2bQ8BJF9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms