Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
Rpap1Q80TE0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC26.03■■□□□ 1.76
Rpap1Q80TE0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC26.03■■□□□ 1.76
Rpap1Q80TE0 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Rpap1Q80TE0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC26.03■■□□□ 1.76
Rpap1Q80TE0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC26.03■■□□□ 1.76
Rpap1Q80TE0 AC107711.5-202ENSMUST00000226429 702 ntBASIC26.03■■□□□ 1.76
Rpap1Q80TE0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Rpap1Q80TE0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Rpap1Q80TE0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC26.02■■□□□ 1.76
Rpap1Q80TE0 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rpap1Q80TE0 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rpap1Q80TE0 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rpap1Q80TE0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC26.02■■□□□ 1.76
Rpap1Q80TE0 Gm7506-201ENSMUST00000207758 815 ntBASIC26.02■■□□□ 1.76
Rpap1Q80TE0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC26.02■■□□□ 1.76
Rpap1Q80TE0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rpap1Q80TE0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rpap1Q80TE0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
Rpap1Q80TE0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rpap1Q80TE0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Rpap1Q80TE0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.76
Rpap1Q80TE0 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.76
Rpap1Q80TE0 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC26.01■■□□□ 1.76
Rpap1Q80TE0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Rpap1Q80TE0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC26.01■■□□□ 1.75
Rpap1Q80TE0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Rpap1Q80TE0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC26.01■■□□□ 1.75
Rpap1Q80TE0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Rpap1Q80TE0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Rpap1Q80TE0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Rpap1Q80TE0 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
Rpap1Q80TE0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Rpap1Q80TE0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Rpap1Q80TE0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Rpap1Q80TE0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Rpap1Q80TE0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
Rpap1Q80TE0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC26■■□□□ 1.75
Rpap1Q80TE0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Rpap1Q80TE0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
Rpap1Q80TE0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Rpap1Q80TE0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
Rpap1Q80TE0 Gm4535-201ENSMUST00000182274 558 ntBASIC26■■□□□ 1.75
Rpap1Q80TE0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC26■■□□□ 1.75
Rpap1Q80TE0 CT943659.1-201ENSMUST00000215459 326 ntBASIC26■■□□□ 1.75
Rpap1Q80TE0 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Rpap1Q80TE0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Rpap1Q80TE0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
Rpap1Q80TE0 Gm10355-201ENSMUST00000097146 517 ntBASIC26■■□□□ 1.75
Rpap1Q80TE0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC26■■□□□ 1.75
Rpap1Q80TE0 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Rpap1Q80TE0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
Rpap1Q80TE0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Rpap1Q80TE0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC26■■□□□ 1.75
Rpap1Q80TE0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Rpap1Q80TE0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC26■■□□□ 1.75
Rpap1Q80TE0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
Rpap1Q80TE0 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rpap1Q80TE0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC25.99■■□□□ 1.75
Rpap1Q80TE0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rpap1Q80TE0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC25.99■■□□□ 1.75
Rpap1Q80TE0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Rpap1Q80TE0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rpap1Q80TE0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rpap1Q80TE0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC25.99■■□□□ 1.75
Rpap1Q80TE0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC25.99■■□□□ 1.75
Rpap1Q80TE0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rpap1Q80TE0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
Rpap1Q80TE0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Rpap1Q80TE0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rpap1Q80TE0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rpap1Q80TE0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rpap1Q80TE0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Rpap1Q80TE0 Gm23935-201ENSMUST00000102303 57 ntBASIC25.98■■□□□ 1.75
Rpap1Q80TE0 Gm24270-201ENSMUST00000102326 57 ntBASIC25.98■■□□□ 1.75
Rpap1Q80TE0 Gm24245-201ENSMUST00000157318 57 ntBASIC25.98■■□□□ 1.75
Rpap1Q80TE0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
Rpap1Q80TE0 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC25.98■■□□□ 1.75
Rpap1Q80TE0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC25.98■■□□□ 1.75
Rpap1Q80TE0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Rpap1Q80TE0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Rpap1Q80TE0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Rpap1Q80TE0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Rpap1Q80TE0 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC25.98■■□□□ 1.75
Rpap1Q80TE0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC25.97■■□□□ 1.75
Rpap1Q80TE0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rpap1Q80TE0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
Rpap1Q80TE0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rpap1Q80TE0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Rpap1Q80TE0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rpap1Q80TE0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC25.97■■□□□ 1.75
Rpap1Q80TE0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rpap1Q80TE0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rpap1Q80TE0 Gm12260-201ENSMUST00000122447 411 ntBASIC25.97■■□□□ 1.75
Rpap1Q80TE0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rpap1Q80TE0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
Rpap1Q80TE0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rpap1Q80TE0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Rpap1Q80TE0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rpap1Q80TE0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms