Protein–RNA interactions for Protein: Q7TPQ3

Shprh, E3 ubiquitin-protein ligase SHPRH, mousemouse

Predictions only

Length 1,674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShprhQ7TPQ3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC23.8■■□□□ 1.4
ShprhQ7TPQ3 Gm11620-201ENSMUST00000118770 1845 ntBASIC23.8■■□□□ 1.4
ShprhQ7TPQ3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ShprhQ7TPQ3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
ShprhQ7TPQ3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ShprhQ7TPQ3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC23.79■■□□□ 1.4
ShprhQ7TPQ3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC23.79■■□□□ 1.4
ShprhQ7TPQ3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC23.79■■□□□ 1.4
ShprhQ7TPQ3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC23.79■■□□□ 1.4
ShprhQ7TPQ3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ShprhQ7TPQ3 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC23.79■■□□□ 1.4
ShprhQ7TPQ3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
ShprhQ7TPQ3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ShprhQ7TPQ3 Zcchc6-207ENSMUST00000225576 2499 ntBASIC23.79■■□□□ 1.4
ShprhQ7TPQ3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ShprhQ7TPQ3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ShprhQ7TPQ3 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ShprhQ7TPQ3 Gm13036-201ENSMUST00000117799 748 ntBASIC23.79■■□□□ 1.4
ShprhQ7TPQ3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC23.79■■□□□ 1.4
ShprhQ7TPQ3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC23.79■■□□□ 1.4
ShprhQ7TPQ3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ShprhQ7TPQ3 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ShprhQ7TPQ3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC23.78■■□□□ 1.4
ShprhQ7TPQ3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
ShprhQ7TPQ3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
ShprhQ7TPQ3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC23.78■■□□□ 1.4
ShprhQ7TPQ3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC23.78■■□□□ 1.4
ShprhQ7TPQ3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
ShprhQ7TPQ3 Gm37584-201ENSMUST00000193595 1290 ntBASIC23.78■■□□□ 1.4
ShprhQ7TPQ3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ShprhQ7TPQ3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC23.78■■□□□ 1.4
ShprhQ7TPQ3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC23.78■■□□□ 1.4
ShprhQ7TPQ3 AC159093.1-201ENSMUST00000227779 380 ntBASIC23.78■■□□□ 1.4
ShprhQ7TPQ3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ShprhQ7TPQ3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
ShprhQ7TPQ3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ShprhQ7TPQ3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ShprhQ7TPQ3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ShprhQ7TPQ3 Dmtn-207ENSMUST00000228001 2437 ntBASIC23.77■■□□□ 1.4
ShprhQ7TPQ3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ShprhQ7TPQ3 Gm37519-201ENSMUST00000191687 2210 ntBASIC23.77■■□□□ 1.4
ShprhQ7TPQ3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ShprhQ7TPQ3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ShprhQ7TPQ3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ShprhQ7TPQ3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
ShprhQ7TPQ3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC23.77■■□□□ 1.4
ShprhQ7TPQ3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ShprhQ7TPQ3 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
ShprhQ7TPQ3 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ShprhQ7TPQ3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ShprhQ7TPQ3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ShprhQ7TPQ3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ShprhQ7TPQ3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
ShprhQ7TPQ3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC23.77■■□□□ 1.4
ShprhQ7TPQ3 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ShprhQ7TPQ3 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
ShprhQ7TPQ3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
ShprhQ7TPQ3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
ShprhQ7TPQ3 Gm25406-201ENSMUST00000157599 105 ntBASIC23.76■■□□□ 1.39
ShprhQ7TPQ3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
ShprhQ7TPQ3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
ShprhQ7TPQ3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC23.76■■□□□ 1.39
ShprhQ7TPQ3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC23.76■■□□□ 1.39
ShprhQ7TPQ3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ShprhQ7TPQ3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ShprhQ7TPQ3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ShprhQ7TPQ3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ShprhQ7TPQ3 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ShprhQ7TPQ3 Gm11780-201ENSMUST00000136880 516 ntBASIC23.76■■□□□ 1.39
ShprhQ7TPQ3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ShprhQ7TPQ3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC23.76■■□□□ 1.39
ShprhQ7TPQ3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC23.76■■□□□ 1.39
ShprhQ7TPQ3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ShprhQ7TPQ3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
ShprhQ7TPQ3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ShprhQ7TPQ3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
ShprhQ7TPQ3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
ShprhQ7TPQ3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ShprhQ7TPQ3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC23.75■■□□□ 1.39
ShprhQ7TPQ3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ShprhQ7TPQ3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
ShprhQ7TPQ3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ShprhQ7TPQ3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
ShprhQ7TPQ3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ShprhQ7TPQ3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
ShprhQ7TPQ3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC23.74■■□□□ 1.39
ShprhQ7TPQ3 Gm5264-201ENSMUST00000190584 848 ntBASIC23.74■■□□□ 1.39
ShprhQ7TPQ3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ShprhQ7TPQ3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ShprhQ7TPQ3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
ShprhQ7TPQ3 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ShprhQ7TPQ3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ShprhQ7TPQ3 Gm14140-201ENSMUST00000119999 995 ntBASIC23.73■■□□□ 1.39
ShprhQ7TPQ3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC23.73■■□□□ 1.39
ShprhQ7TPQ3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
ShprhQ7TPQ3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ShprhQ7TPQ3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
ShprhQ7TPQ3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC23.73■■□□□ 1.39
ShprhQ7TPQ3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ShprhQ7TPQ3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms