Protein–RNA interactions for Protein: Q78PY7

Snd1, Staphylococcal nuclease domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snd1Q78PY7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snd1Q78PY7 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.34■□□□□ 0.53
Snd1Q78PY7 Gm11249-201ENSMUST00000117071 859 ntBASIC18.34■□□□□ 0.53
Snd1Q78PY7 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.34■□□□□ 0.53
Snd1Q78PY7 Gm10138-203ENSMUST00000206952 366 ntBASIC18.34■□□□□ 0.53
Snd1Q78PY7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Snd1Q78PY7 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.34■□□□□ 0.53
Snd1Q78PY7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snd1Q78PY7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snd1Q78PY7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snd1Q78PY7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Snd1Q78PY7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Snd1Q78PY7 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Snd1Q78PY7 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snd1Q78PY7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Snd1Q78PY7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snd1Q78PY7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snd1Q78PY7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snd1Q78PY7 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snd1Q78PY7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Snd1Q78PY7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Snd1Q78PY7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Snd1Q78PY7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Snd1Q78PY7 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Snd1Q78PY7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Snd1Q78PY7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Snd1Q78PY7 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Snd1Q78PY7 Gm6576-201ENSMUST00000169678 883 ntBASIC18.33■□□□□ 0.52
Snd1Q78PY7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.33■□□□□ 0.52
Snd1Q78PY7 Mtag2-201ENSMUST00000058665 714 ntBASIC18.33■□□□□ 0.52
Snd1Q78PY7 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Snd1Q78PY7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Snd1Q78PY7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Snd1Q78PY7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Snd1Q78PY7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Snd1Q78PY7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Snd1Q78PY7 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Snd1Q78PY7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Snd1Q78PY7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snd1Q78PY7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snd1Q78PY7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snd1Q78PY7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
Snd1Q78PY7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snd1Q78PY7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snd1Q78PY7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snd1Q78PY7 Gm13158-201ENSMUST00000122007 736 ntBASIC18.32■□□□□ 0.52
Snd1Q78PY7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snd1Q78PY7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.32■□□□□ 0.52
Snd1Q78PY7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.32■□□□□ 0.52
Snd1Q78PY7 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snd1Q78PY7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snd1Q78PY7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Snd1Q78PY7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snd1Q78PY7 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snd1Q78PY7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snd1Q78PY7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snd1Q78PY7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Snd1Q78PY7 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snd1Q78PY7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snd1Q78PY7 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snd1Q78PY7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snd1Q78PY7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snd1Q78PY7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Snd1Q78PY7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.31■□□□□ 0.52
Snd1Q78PY7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snd1Q78PY7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snd1Q78PY7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Snd1Q78PY7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Snd1Q78PY7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snd1Q78PY7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snd1Q78PY7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Snd1Q78PY7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snd1Q78PY7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snd1Q78PY7 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.3■□□□□ 0.52
Snd1Q78PY7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snd1Q78PY7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snd1Q78PY7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snd1Q78PY7 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Snd1Q78PY7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Snd1Q78PY7 Mir6349-201ENSMUST00000184059 97 ntBASIC18.3■□□□□ 0.52
Snd1Q78PY7 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.3■□□□□ 0.52
Snd1Q78PY7 Gm18666-201ENSMUST00000190039 958 ntBASIC18.3■□□□□ 0.52
Snd1Q78PY7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.3■□□□□ 0.52
Snd1Q78PY7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.3■□□□□ 0.52
Snd1Q78PY7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snd1Q78PY7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snd1Q78PY7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snd1Q78PY7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snd1Q78PY7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.3■□□□□ 0.52
Snd1Q78PY7 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snd1Q78PY7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snd1Q78PY7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snd1Q78PY7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snd1Q78PY7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snd1Q78PY7 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snd1Q78PY7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Snd1Q78PY7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Snd1Q78PY7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Snd1Q78PY7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Snd1Q78PY7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms