Protein–RNA interactions for Protein: Q6ZWR6

Syne1, Nesprin-1, mousemouse

Predictions only

Length 8,799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1Q6ZWR6 Gm6443-201ENSMUST00000203599 874 ntBASIC5.72□□□□□ -1.49
Syne1Q6ZWR6 AC153889.1-201ENSMUST00000219257 330 ntBASIC5.72□□□□□ -1.49
Syne1Q6ZWR6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Syne1Q6ZWR6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Syne1Q6ZWR6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Syne1Q6ZWR6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Syne1Q6ZWR6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Syne1Q6ZWR6 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Syne1Q6ZWR6 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Syne1Q6ZWR6 Gm9194-201ENSMUST00000220749 1447 ntBASIC5.72□□□□□ -1.49
Syne1Q6ZWR6 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Syne1Q6ZWR6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC5.71□□□□□ -1.49
Syne1Q6ZWR6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
Syne1Q6ZWR6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC5.71□□□□□ -1.49
Syne1Q6ZWR6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Syne1Q6ZWR6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Syne1Q6ZWR6 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Syne1Q6ZWR6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Syne1Q6ZWR6 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Syne1Q6ZWR6 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Syne1Q6ZWR6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Syne1Q6ZWR6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Syne1Q6ZWR6 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Syne1Q6ZWR6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Wnt10b-204ENSMUST00000226655 1807 ntBASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Gm45141-201ENSMUST00000206502 1888 ntBASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Gm27000-201ENSMUST00000182943 842 ntBASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Gm11452-201ENSMUST00000122376 690 ntBASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Syne1Q6ZWR6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Gm18206-201ENSMUST00000207027 926 ntBASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Gm45328-201ENSMUST00000210942 917 ntBASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Gm9449-201ENSMUST00000207265 1011 ntBASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Syne1Q6ZWR6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms