Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx55Q6ZPL9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.11■□□□□ 0.65
Ddx55Q6ZPL9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx55Q6ZPL9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx55Q6ZPL9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx55Q6ZPL9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx55Q6ZPL9 Gm11779-201ENSMUST00000118541 368 ntBASIC19.11■□□□□ 0.65
Ddx55Q6ZPL9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx55Q6ZPL9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx55Q6ZPL9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.11■□□□□ 0.65
Ddx55Q6ZPL9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx55Q6ZPL9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx55Q6ZPL9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx55Q6ZPL9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx55Q6ZPL9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx55Q6ZPL9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx55Q6ZPL9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx55Q6ZPL9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.1■□□□□ 0.65
Ddx55Q6ZPL9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.1■□□□□ 0.65
Ddx55Q6ZPL9 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ddx55Q6ZPL9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx55Q6ZPL9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx55Q6ZPL9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx55Q6ZPL9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx55Q6ZPL9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.1■□□□□ 0.65
Ddx55Q6ZPL9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.1■□□□□ 0.65
Ddx55Q6ZPL9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx55Q6ZPL9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx55Q6ZPL9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx55Q6ZPL9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx55Q6ZPL9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx55Q6ZPL9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx55Q6ZPL9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx55Q6ZPL9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx55Q6ZPL9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Ddx55Q6ZPL9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.09■□□□□ 0.65
Ddx55Q6ZPL9 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx55Q6ZPL9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Ddx55Q6ZPL9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ddx55Q6ZPL9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx55Q6ZPL9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx55Q6ZPL9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Ddx55Q6ZPL9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx55Q6ZPL9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx55Q6ZPL9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx55Q6ZPL9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.09■□□□□ 0.65
Ddx55Q6ZPL9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx55Q6ZPL9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.09■□□□□ 0.65
Ddx55Q6ZPL9 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx55Q6ZPL9 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.09■□□□□ 0.65
Ddx55Q6ZPL9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx55Q6ZPL9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx55Q6ZPL9 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx55Q6ZPL9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx55Q6ZPL9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx55Q6ZPL9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx55Q6ZPL9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.08■□□□□ 0.65
Ddx55Q6ZPL9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx55Q6ZPL9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ddx55Q6ZPL9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx55Q6ZPL9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC19.08■□□□□ 0.64
Ddx55Q6ZPL9 Gm25745-201ENSMUST00000174945 133 ntBASIC19.08■□□□□ 0.64
Ddx55Q6ZPL9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC19.08■□□□□ 0.64
Ddx55Q6ZPL9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.08■□□□□ 0.64
Ddx55Q6ZPL9 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.08■□□□□ 0.64
Ddx55Q6ZPL9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx55Q6ZPL9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx55Q6ZPL9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx55Q6ZPL9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Ddx55Q6ZPL9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx55Q6ZPL9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx55Q6ZPL9 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ddx55Q6ZPL9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.08■□□□□ 0.64
Ddx55Q6ZPL9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ddx55Q6ZPL9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms