Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Npc1l1Q6T3U4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.12■□□□□ 0.81
Npc1l1Q6T3U4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Npc1l1Q6T3U4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Npc1l1Q6T3U4 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Npc1l1Q6T3U4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Npc1l1Q6T3U4 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Npc1l1Q6T3U4 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Npc1l1Q6T3U4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.12■□□□□ 0.81
Npc1l1Q6T3U4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Npc1l1Q6T3U4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Npc1l1Q6T3U4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Npc1l1Q6T3U4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.11■□□□□ 0.81
Npc1l1Q6T3U4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Npc1l1Q6T3U4 Gm24589-201ENSMUST00000116692 94 ntBASIC20.11■□□□□ 0.81
Npc1l1Q6T3U4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Npc1l1Q6T3U4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Npc1l1Q6T3U4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Npc1l1Q6T3U4 Gm44771-201ENSMUST00000206975 626 ntBASIC20.11■□□□□ 0.81
Npc1l1Q6T3U4 Gm45328-201ENSMUST00000210942 917 ntBASIC20.11■□□□□ 0.81
Npc1l1Q6T3U4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Npc1l1Q6T3U4 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Npc1l1Q6T3U4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.11■□□□□ 0.81
Npc1l1Q6T3U4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Npc1l1Q6T3U4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Npc1l1Q6T3U4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Npc1l1Q6T3U4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Npc1l1Q6T3U4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Olfr129-201ENSMUST00000122318 993 ntBASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Npc1l1Q6T3U4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Npc1l1Q6T3U4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Npc1l1Q6T3U4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Npc1l1Q6T3U4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Npc1l1Q6T3U4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Npc1l1Q6T3U4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Npc1l1Q6T3U4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.09■□□□□ 0.81
Npc1l1Q6T3U4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Npc1l1Q6T3U4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Npc1l1Q6T3U4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Npc1l1Q6T3U4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Npc1l1Q6T3U4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Npc1l1Q6T3U4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Npc1l1Q6T3U4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Npc1l1Q6T3U4 Gm15635-204ENSMUST00000208024 2539 ntBASIC20.09■□□□□ 0.81
Npc1l1Q6T3U4 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Npc1l1Q6T3U4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Npc1l1Q6T3U4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Npc1l1Q6T3U4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Npc1l1Q6T3U4 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Npc1l1Q6T3U4 Gm44450-201ENSMUST00000199528 114 ntBASIC20.08■□□□□ 0.81
Npc1l1Q6T3U4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Npc1l1Q6T3U4 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Npc1l1Q6T3U4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Npc1l1Q6T3U4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Npc1l1Q6T3U4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Npc1l1Q6T3U4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Npc1l1Q6T3U4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Npc1l1Q6T3U4 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms