Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ddx58Q6Q899 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx58Q6Q899 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
Ddx58Q6Q899 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx58Q6Q899 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx58Q6Q899 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Ddx58Q6Q899 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.78■□□□□ 0.92
Ddx58Q6Q899 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx58Q6Q899 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Ddx58Q6Q899 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx58Q6Q899 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Ddx58Q6Q899 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx58Q6Q899 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Ddx58Q6Q899 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx58Q6Q899 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.78■□□□□ 0.92
Ddx58Q6Q899 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx58Q6Q899 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx58Q6Q899 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx58Q6Q899 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ddx58Q6Q899 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx58Q6Q899 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx58Q6Q899 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx58Q6Q899 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.77■□□□□ 0.92
Ddx58Q6Q899 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.77■□□□□ 0.92
Ddx58Q6Q899 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx58Q6Q899 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx58Q6Q899 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC20.77■□□□□ 0.92
Ddx58Q6Q899 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.77■□□□□ 0.92
Ddx58Q6Q899 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx58Q6Q899 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Ddx58Q6Q899 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ddx58Q6Q899 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ddx58Q6Q899 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ddx58Q6Q899 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ddx58Q6Q899 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC20.76■□□□□ 0.91
Ddx58Q6Q899 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx58Q6Q899 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx58Q6Q899 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx58Q6Q899 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx58Q6Q899 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Ddx58Q6Q899 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx58Q6Q899 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Ddx58Q6Q899 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ddx58Q6Q899 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Ddx58Q6Q899 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx58Q6Q899 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx58Q6Q899 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx58Q6Q899 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx58Q6Q899 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx58Q6Q899 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ddx58Q6Q899 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ddx58Q6Q899 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx58Q6Q899 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx58Q6Q899 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.75■□□□□ 0.91
Ddx58Q6Q899 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC20.75■□□□□ 0.91
Ddx58Q6Q899 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC20.75■□□□□ 0.91
Ddx58Q6Q899 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx58Q6Q899 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx58Q6Q899 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.75■□□□□ 0.91
Ddx58Q6Q899 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx58Q6Q899 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Ddx58Q6Q899 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx58Q6Q899 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx58Q6Q899 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx58Q6Q899 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx58Q6Q899 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Ddx58Q6Q899 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ddx58Q6Q899 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx58Q6Q899 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx58Q6Q899 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx58Q6Q899 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx58Q6Q899 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx58Q6Q899 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx58Q6Q899 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.74■□□□□ 0.91
Ddx58Q6Q899 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC20.74■□□□□ 0.91
Ddx58Q6Q899 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx58Q6Q899 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx58Q6Q899 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx58Q6Q899 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx58Q6Q899 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.74■□□□□ 0.91
Ddx58Q6Q899 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx58Q6Q899 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.74■□□□□ 0.91
Ddx58Q6Q899 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Ddx58Q6Q899 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms