Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CtifQ6PEE2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CtifQ6PEE2 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.98■□□□□ 0.47
CtifQ6PEE2 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CtifQ6PEE2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CtifQ6PEE2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CtifQ6PEE2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.98■□□□□ 0.47
CtifQ6PEE2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CtifQ6PEE2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CtifQ6PEE2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
CtifQ6PEE2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CtifQ6PEE2 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.98■□□□□ 0.47
CtifQ6PEE2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.98■□□□□ 0.47
CtifQ6PEE2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CtifQ6PEE2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CtifQ6PEE2 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CtifQ6PEE2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CtifQ6PEE2 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CtifQ6PEE2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CtifQ6PEE2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CtifQ6PEE2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CtifQ6PEE2 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CtifQ6PEE2 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CtifQ6PEE2 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CtifQ6PEE2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
CtifQ6PEE2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CtifQ6PEE2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CtifQ6PEE2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CtifQ6PEE2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CtifQ6PEE2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CtifQ6PEE2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.97■□□□□ 0.47
CtifQ6PEE2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CtifQ6PEE2 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CtifQ6PEE2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CtifQ6PEE2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CtifQ6PEE2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CtifQ6PEE2 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CtifQ6PEE2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CtifQ6PEE2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.97■□□□□ 0.47
CtifQ6PEE2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CtifQ6PEE2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CtifQ6PEE2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CtifQ6PEE2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CtifQ6PEE2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CtifQ6PEE2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CtifQ6PEE2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CtifQ6PEE2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CtifQ6PEE2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CtifQ6PEE2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CtifQ6PEE2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CtifQ6PEE2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.96■□□□□ 0.47
CtifQ6PEE2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CtifQ6PEE2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.96■□□□□ 0.47
CtifQ6PEE2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CtifQ6PEE2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CtifQ6PEE2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CtifQ6PEE2 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CtifQ6PEE2 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CtifQ6PEE2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CtifQ6PEE2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CtifQ6PEE2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CtifQ6PEE2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CtifQ6PEE2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CtifQ6PEE2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CtifQ6PEE2 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CtifQ6PEE2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CtifQ6PEE2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CtifQ6PEE2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CtifQ6PEE2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.95■□□□□ 0.46
CtifQ6PEE2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.95■□□□□ 0.46
CtifQ6PEE2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CtifQ6PEE2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.95■□□□□ 0.46
CtifQ6PEE2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CtifQ6PEE2 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CtifQ6PEE2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CtifQ6PEE2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CtifQ6PEE2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CtifQ6PEE2 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CtifQ6PEE2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CtifQ6PEE2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.95■□□□□ 0.46
CtifQ6PEE2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CtifQ6PEE2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CtifQ6PEE2 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CtifQ6PEE2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CtifQ6PEE2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CtifQ6PEE2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CtifQ6PEE2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CtifQ6PEE2 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CtifQ6PEE2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CtifQ6PEE2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.94■□□□□ 0.46
CtifQ6PEE2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CtifQ6PEE2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CtifQ6PEE2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CtifQ6PEE2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.94■□□□□ 0.46
CtifQ6PEE2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CtifQ6PEE2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CtifQ6PEE2 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CtifQ6PEE2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CtifQ6PEE2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CtifQ6PEE2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms