Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sycp1Q62209 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sycp1Q62209 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sycp1Q62209 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Sycp1Q62209 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sycp1Q62209 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sycp1Q62209 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sycp1Q62209 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sycp1Q62209 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sycp1Q62209 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sycp1Q62209 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sycp1Q62209 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sycp1Q62209 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sycp1Q62209 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sycp1Q62209 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sycp1Q62209 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sycp1Q62209 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.86■□□□□ 0.61
Sycp1Q62209 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Sycp1Q62209 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Sycp1Q62209 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sycp1Q62209 Gm37025-201ENSMUST00000195159 829 ntBASIC18.86■□□□□ 0.61
Sycp1Q62209 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sycp1Q62209 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sycp1Q62209 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sycp1Q62209 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sycp1Q62209 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sycp1Q62209 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sycp1Q62209 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sycp1Q62209 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sycp1Q62209 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sycp1Q62209 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sycp1Q62209 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sycp1Q62209 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sycp1Q62209 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.85■□□□□ 0.61
Sycp1Q62209 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Sycp1Q62209 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sycp1Q62209 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Sycp1Q62209 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Sycp1Q62209 Gm15565-201ENSMUST00000118890 427 ntBASIC18.85■□□□□ 0.61
Sycp1Q62209 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sycp1Q62209 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.85■□□□□ 0.61
Sycp1Q62209 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sycp1Q62209 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sycp1Q62209 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sycp1Q62209 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sycp1Q62209 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sycp1Q62209 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sycp1Q62209 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Sycp1Q62209 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Sycp1Q62209 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sycp1Q62209 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sycp1Q62209 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sycp1Q62209 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Sycp1Q62209 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Sycp1Q62209 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sycp1Q62209 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sycp1Q62209 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.84■□□□□ 0.61
Sycp1Q62209 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.84■□□□□ 0.61
Sycp1Q62209 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sycp1Q62209 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sycp1Q62209 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sycp1Q62209 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Sycp1Q62209 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
Sycp1Q62209 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.84■□□□□ 0.61
Sycp1Q62209 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sycp1Q62209 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sycp1Q62209 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.83■□□□□ 0.61
Sycp1Q62209 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sycp1Q62209 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Sycp1Q62209 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Sycp1Q62209 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.83■□□□□ 0.6
Sycp1Q62209 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sycp1Q62209 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sycp1Q62209 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sycp1Q62209 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sycp1Q62209 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sycp1Q62209 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.83■□□□□ 0.6
Sycp1Q62209 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Sycp1Q62209 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sycp1Q62209 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sycp1Q62209 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sycp1Q62209 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.82■□□□□ 0.6
Sycp1Q62209 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.82■□□□□ 0.6
Sycp1Q62209 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sycp1Q62209 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sycp1Q62209 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Sycp1Q62209 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
Sycp1Q62209 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sycp1Q62209 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sycp1Q62209 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.82■□□□□ 0.6
Sycp1Q62209 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.82■□□□□ 0.6
Sycp1Q62209 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sycp1Q62209 Gm7791-201ENSMUST00000219066 539 ntBASIC18.82■□□□□ 0.6
Sycp1Q62209 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.82■□□□□ 0.6
Sycp1Q62209 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sycp1Q62209 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sycp1Q62209 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sycp1Q62209 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sycp1Q62209 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.82■□□□□ 0.6
Sycp1Q62209 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms