Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a4Q60857 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Slc6a4Q60857 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a4Q60857 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.21■□□□□ 0.35
Slc6a4Q60857 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a4Q60857 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.21■□□□□ 0.35
Slc6a4Q60857 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.21■□□□□ 0.35
Slc6a4Q60857 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Slc6a4Q60857 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.21■□□□□ 0.35
Slc6a4Q60857 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a4Q60857 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a4Q60857 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a4Q60857 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a4Q60857 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Slc6a4Q60857 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.21■□□□□ 0.35
Slc6a4Q60857 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Slc6a4Q60857 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.21■□□□□ 0.34
Slc6a4Q60857 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Slc6a4Q60857 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Slc6a4Q60857 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Slc6a4Q60857 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a4Q60857 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a4Q60857 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Slc6a4Q60857 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.2■□□□□ 0.34
Slc6a4Q60857 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a4Q60857 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a4Q60857 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.2■□□□□ 0.34
Slc6a4Q60857 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a4Q60857 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Slc6a4Q60857 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.2■□□□□ 0.34
Slc6a4Q60857 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a4Q60857 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.2■□□□□ 0.34
Slc6a4Q60857 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a4Q60857 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a4Q60857 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a4Q60857 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a4Q60857 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Slc6a4Q60857 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a4Q60857 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a4Q60857 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a4Q60857 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a4Q60857 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a4Q60857 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Slc6a4Q60857 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a4Q60857 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Slc6a4Q60857 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.19■□□□□ 0.34
Slc6a4Q60857 Gm9103-201ENSMUST00000119371 405 ntBASIC17.19■□□□□ 0.34
Slc6a4Q60857 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.19■□□□□ 0.34
Slc6a4Q60857 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a4Q60857 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.19■□□□□ 0.34
Slc6a4Q60857 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Slc6a4Q60857 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Slc6a4Q60857 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Slc6a4Q60857 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.18■□□□□ 0.34
Slc6a4Q60857 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a4Q60857 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.18■□□□□ 0.34
Slc6a4Q60857 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a4Q60857 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a4Q60857 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a4Q60857 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a4Q60857 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Slc6a4Q60857 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.18■□□□□ 0.34
Slc6a4Q60857 Gm27742-201ENSMUST00000184667 60 ntBASIC17.18■□□□□ 0.34
Slc6a4Q60857 Gm18421-201ENSMUST00000204122 625 ntBASIC17.18■□□□□ 0.34
Slc6a4Q60857 Gm45328-201ENSMUST00000210942 917 ntBASIC17.18■□□□□ 0.34
Slc6a4Q60857 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a4Q60857 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a4Q60857 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a4Q60857 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a4Q60857 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.18■□□□□ 0.34
Slc6a4Q60857 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a4Q60857 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a4Q60857 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a4Q60857 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a4Q60857 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a4Q60857 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a4Q60857 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a4Q60857 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.18■□□□□ 0.34
Slc6a4Q60857 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a4Q60857 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Slc6a4Q60857 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.18■□□□□ 0.34
Slc6a4Q60857 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.17■□□□□ 0.34
Slc6a4Q60857 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Slc6a4Q60857 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a4Q60857 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a4Q60857 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a4Q60857 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a4Q60857 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.17■□□□□ 0.34
Slc6a4Q60857 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a4Q60857 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.17■□□□□ 0.34
Slc6a4Q60857 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a4Q60857 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Slc6a4Q60857 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a4Q60857 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a4Q60857 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.17■□□□□ 0.34
Slc6a4Q60857 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a4Q60857 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a4Q60857 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a4Q60857 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a4Q60857 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms