Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim38Q5SZ99 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim38Q5SZ99 Haglr-201ENSMUST00000100000 2085 ntBASIC17.43■□□□□ 0.38
Trim38Q5SZ99 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim38Q5SZ99 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim38Q5SZ99 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim38Q5SZ99 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim38Q5SZ99 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim38Q5SZ99 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.43■□□□□ 0.38
Trim38Q5SZ99 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim38Q5SZ99 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim38Q5SZ99 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim38Q5SZ99 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim38Q5SZ99 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim38Q5SZ99 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.43■□□□□ 0.38
Trim38Q5SZ99 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trim38Q5SZ99 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.43■□□□□ 0.38
Trim38Q5SZ99 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim38Q5SZ99 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim38Q5SZ99 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim38Q5SZ99 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim38Q5SZ99 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.42■□□□□ 0.38
Trim38Q5SZ99 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim38Q5SZ99 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.42■□□□□ 0.38
Trim38Q5SZ99 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim38Q5SZ99 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.42■□□□□ 0.38
Trim38Q5SZ99 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim38Q5SZ99 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim38Q5SZ99 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim38Q5SZ99 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim38Q5SZ99 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim38Q5SZ99 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim38Q5SZ99 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim38Q5SZ99 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.42■□□□□ 0.38
Trim38Q5SZ99 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim38Q5SZ99 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Trim38Q5SZ99 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim38Q5SZ99 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim38Q5SZ99 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim38Q5SZ99 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim38Q5SZ99 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim38Q5SZ99 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim38Q5SZ99 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim38Q5SZ99 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Trim38Q5SZ99 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.4■□□□□ 0.38
Trim38Q5SZ99 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.4■□□□□ 0.38
Trim38Q5SZ99 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim38Q5SZ99 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.4■□□□□ 0.38
Trim38Q5SZ99 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim38Q5SZ99 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim38Q5SZ99 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim38Q5SZ99 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim38Q5SZ99 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim38Q5SZ99 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim38Q5SZ99 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim38Q5SZ99 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim38Q5SZ99 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim38Q5SZ99 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim38Q5SZ99 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim38Q5SZ99 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms