Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Vps54Q5SPW0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Vps54Q5SPW0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vps54Q5SPW0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vps54Q5SPW0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vps54Q5SPW0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.19■□□□□ 0.82
Vps54Q5SPW0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vps54Q5SPW0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC20.19■□□□□ 0.82
Vps54Q5SPW0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vps54Q5SPW0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vps54Q5SPW0 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vps54Q5SPW0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Vps54Q5SPW0 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Vps54Q5SPW0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vps54Q5SPW0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.18■□□□□ 0.82
Vps54Q5SPW0 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Vps54Q5SPW0 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Vps54Q5SPW0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Vps54Q5SPW0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.18■□□□□ 0.82
Vps54Q5SPW0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Vps54Q5SPW0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vps54Q5SPW0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Vps54Q5SPW0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vps54Q5SPW0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Vps54Q5SPW0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vps54Q5SPW0 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Vps54Q5SPW0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.17■□□□□ 0.82
Vps54Q5SPW0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps54Q5SPW0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Vps54Q5SPW0 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps54Q5SPW0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps54Q5SPW0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Vps54Q5SPW0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps54Q5SPW0 Mir770-201ENSMUST00000103252 94 ntBASIC20.17■□□□□ 0.82
Vps54Q5SPW0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.17■□□□□ 0.82
Vps54Q5SPW0 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps54Q5SPW0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.17■□□□□ 0.82
Vps54Q5SPW0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps54Q5SPW0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.17■□□□□ 0.82
Vps54Q5SPW0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps54Q5SPW0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps54Q5SPW0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vps54Q5SPW0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.17■□□□□ 0.82
Vps54Q5SPW0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps54Q5SPW0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps54Q5SPW0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps54Q5SPW0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps54Q5SPW0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vps54Q5SPW0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Vps54Q5SPW0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Vps54Q5SPW0 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.17■□□□□ 0.82
Vps54Q5SPW0 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Vps54Q5SPW0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC20.16■□□□□ 0.82
Vps54Q5SPW0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps54Q5SPW0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vps54Q5SPW0 Gm11841-201ENSMUST00000117060 1963 ntBASIC20.16■□□□□ 0.82
Vps54Q5SPW0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps54Q5SPW0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps54Q5SPW0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Vps54Q5SPW0 Gm25016-201ENSMUST00000158399 131 ntBASIC20.16■□□□□ 0.82
Vps54Q5SPW0 Gm29518-201ENSMUST00000190858 372 ntBASIC20.16■□□□□ 0.82
Vps54Q5SPW0 Gm44450-201ENSMUST00000199528 114 ntBASIC20.16■□□□□ 0.82
Vps54Q5SPW0 Gm18115-201ENSMUST00000221209 621 ntBASIC20.16■□□□□ 0.82
Vps54Q5SPW0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps54Q5SPW0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps54Q5SPW0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps54Q5SPW0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Vps54Q5SPW0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps54Q5SPW0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps54Q5SPW0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps54Q5SPW0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Vps54Q5SPW0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Vps54Q5SPW0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Vps54Q5SPW0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Vps54Q5SPW0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vps54Q5SPW0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vps54Q5SPW0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.15■□□□□ 0.82
Vps54Q5SPW0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.15■□□□□ 0.82
Vps54Q5SPW0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20.15■□□□□ 0.82
Vps54Q5SPW0 Gm17808-201ENSMUST00000200859 894 ntBASIC20.15■□□□□ 0.82
Vps54Q5SPW0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vps54Q5SPW0 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.15■□□□□ 0.82
Vps54Q5SPW0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Vps54Q5SPW0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vps54Q5SPW0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vps54Q5SPW0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vps54Q5SPW0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Vps54Q5SPW0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC20.15■□□□□ 0.82
Vps54Q5SPW0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vps54Q5SPW0 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Vps54Q5SPW0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Vps54Q5SPW0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Vps54Q5SPW0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Vps54Q5SPW0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Vps54Q5SPW0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Vps54Q5SPW0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vps54Q5SPW0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vps54Q5SPW0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vps54Q5SPW0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Vps54Q5SPW0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms