Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav8d-1Q5R1H8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Gm44549-201ENSMUST00000208351 577 ntBASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav8d-1Q5R1H8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8d-1Q5R1H8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8d-1Q5R1H8 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8d-1Q5R1H8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8d-1Q5R1H8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8d-1Q5R1H8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8d-1Q5R1H8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8d-1Q5R1H8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
Trav8d-1Q5R1H8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav8d-1Q5R1H8 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8d-1Q5R1H8 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.81□□□□□ -0.2
Trav8d-1Q5R1H8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8d-1Q5R1H8 Gm2559-201ENSMUST00000201323 363 ntBASIC13.81□□□□□ -0.2
Trav8d-1Q5R1H8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8d-1Q5R1H8 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8d-1Q5R1H8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Trav8d-1Q5R1H8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav8d-1Q5R1H8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8d-1Q5R1H8 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav8d-1Q5R1H8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8d-1Q5R1H8 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav8d-1Q5R1H8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav8d-1Q5R1H8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms