Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5d-4Q5R1F6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5d-4Q5R1F6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav5d-4Q5R1F6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5d-4Q5R1F6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav5d-4Q5R1F6 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5d-4Q5R1F6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5d-4Q5R1F6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav5d-4Q5R1F6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5d-4Q5R1F6 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5d-4Q5R1F6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5d-4Q5R1F6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5d-4Q5R1F6 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav5d-4Q5R1F6 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Trav5d-4Q5R1F6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav5d-4Q5R1F6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.45□□□□□ -0.1
Trav5d-4Q5R1F6 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav5d-4Q5R1F6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav5d-4Q5R1F6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5d-4Q5R1F6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5d-4Q5R1F6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5d-4Q5R1F6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5d-4Q5R1F6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5d-4Q5R1F6 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5d-4Q5R1F6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5d-4Q5R1F6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.43□□□□□ -0.1
Trav5d-4Q5R1F6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5d-4Q5R1F6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5d-4Q5R1F6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5d-4Q5R1F6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5d-4Q5R1F6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5d-4Q5R1F6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.43□□□□□ -0.1
Trav5d-4Q5R1F6 Gm7791-201ENSMUST00000219066 539 ntBASIC14.43□□□□□ -0.1
Trav5d-4Q5R1F6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5d-4Q5R1F6 Odf3b-204ENSMUST00000227834 930 ntBASIC14.43□□□□□ -0.1
Trav5d-4Q5R1F6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5d-4Q5R1F6 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5d-4Q5R1F6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5d-4Q5R1F6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav5d-4Q5R1F6 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms