Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Mir6349-201ENSMUST00000184059 97 ntBASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gm18671-201ENSMUST00000214826 683 ntBASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gm7290-201ENSMUST00000104990 617 ntBASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gm12918-201ENSMUST00000120234 636 ntBASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gm15710-201ENSMUST00000121821 636 ntBASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gm5075-201ENSMUST00000196916 622 ntBASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gm10033-202ENSMUST00000211874 928 ntBASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 AC107711.5-202ENSMUST00000226429 702 ntBASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Gm6211-202ENSMUST00000167849 925 ntBASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trav15-1-dv6-1Q5R1D2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms