Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clhc1Q5M6W3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clhc1Q5M6W3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Clhc1Q5M6W3 Gm12441-201ENSMUST00000121806 588 ntBASIC16.28■□□□□ 0.2
Clhc1Q5M6W3 Mir8112-201ENSMUST00000184382 131 ntBASIC16.28■□□□□ 0.2
Clhc1Q5M6W3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Clhc1Q5M6W3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clhc1Q5M6W3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clhc1Q5M6W3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clhc1Q5M6W3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Clhc1Q5M6W3 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clhc1Q5M6W3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC16.28■□□□□ 0.2
Clhc1Q5M6W3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.28■□□□□ 0.2
Clhc1Q5M6W3 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clhc1Q5M6W3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clhc1Q5M6W3 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clhc1Q5M6W3 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clhc1Q5M6W3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.27■□□□□ 0.2
Clhc1Q5M6W3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.27■□□□□ 0.2
Clhc1Q5M6W3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.27■□□□□ 0.2
Clhc1Q5M6W3 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.27■□□□□ 0.2
Clhc1Q5M6W3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.27■□□□□ 0.2
Clhc1Q5M6W3 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clhc1Q5M6W3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clhc1Q5M6W3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clhc1Q5M6W3 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Clhc1Q5M6W3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clhc1Q5M6W3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clhc1Q5M6W3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clhc1Q5M6W3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clhc1Q5M6W3 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clhc1Q5M6W3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clhc1Q5M6W3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clhc1Q5M6W3 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clhc1Q5M6W3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clhc1Q5M6W3 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clhc1Q5M6W3 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clhc1Q5M6W3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clhc1Q5M6W3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clhc1Q5M6W3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clhc1Q5M6W3 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clhc1Q5M6W3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clhc1Q5M6W3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clhc1Q5M6W3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.26■□□□□ 0.19
Clhc1Q5M6W3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Clhc1Q5M6W3 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.26■□□□□ 0.19
Clhc1Q5M6W3 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.26■□□□□ 0.19
Clhc1Q5M6W3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clhc1Q5M6W3 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Clhc1Q5M6W3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.26■□□□□ 0.19
Clhc1Q5M6W3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clhc1Q5M6W3 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clhc1Q5M6W3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clhc1Q5M6W3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clhc1Q5M6W3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clhc1Q5M6W3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clhc1Q5M6W3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clhc1Q5M6W3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clhc1Q5M6W3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clhc1Q5M6W3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clhc1Q5M6W3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clhc1Q5M6W3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clhc1Q5M6W3 Gm12896-201ENSMUST00000118430 226 ntBASIC16.24■□□□□ 0.19
Clhc1Q5M6W3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.24■□□□□ 0.19
Clhc1Q5M6W3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clhc1Q5M6W3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clhc1Q5M6W3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clhc1Q5M6W3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clhc1Q5M6W3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clhc1Q5M6W3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.24■□□□□ 0.19
Clhc1Q5M6W3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clhc1Q5M6W3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clhc1Q5M6W3 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clhc1Q5M6W3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clhc1Q5M6W3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clhc1Q5M6W3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clhc1Q5M6W3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms