Protein–RNA interactions for Protein: Q5F4S9

Trpm3, Transient receptor potential cation channel, subfamily M, member 3, mousemouse

Predictions only

Length 1,721 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm3Q5F4S9 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trpm3Q5F4S9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trpm3Q5F4S9 Gm9889-202ENSMUST00000206983 1577 ntBASIC21.26■□□□□ 0.99
Trpm3Q5F4S9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trpm3Q5F4S9 Gm15165-201ENSMUST00000118140 502 ntBASIC21.26■□□□□ 0.99
Trpm3Q5F4S9 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trpm3Q5F4S9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trpm3Q5F4S9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Trpm3Q5F4S9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trpm3Q5F4S9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trpm3Q5F4S9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
Trpm3Q5F4S9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC21.25■□□□□ 0.99
Trpm3Q5F4S9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trpm3Q5F4S9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Trpm3Q5F4S9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trpm3Q5F4S9 Gm13216-201ENSMUST00000117145 591 ntBASIC21.25■□□□□ 0.99
Trpm3Q5F4S9 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trpm3Q5F4S9 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC21.25■□□□□ 0.99
Trpm3Q5F4S9 Rps4l-201ENSMUST00000071745 943 ntBASIC21.25■□□□□ 0.99
Trpm3Q5F4S9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trpm3Q5F4S9 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Trpm3Q5F4S9 Gm6598-201ENSMUST00000202719 2615 ntBASIC21.25■□□□□ 0.99
Trpm3Q5F4S9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trpm3Q5F4S9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Trpm3Q5F4S9 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trpm3Q5F4S9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Trpm3Q5F4S9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 Gm12644-201ENSMUST00000119935 606 ntBASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 Cmtm5-203ENSMUST00000227441 610 ntBASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 Gm7935-201ENSMUST00000100555 1278 ntBASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 AC161829.1-201ENSMUST00000220298 281 ntBASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trpm3Q5F4S9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trpm3Q5F4S9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Trpm3Q5F4S9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trpm3Q5F4S9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trpm3Q5F4S9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trpm3Q5F4S9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trpm3Q5F4S9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trpm3Q5F4S9 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC21.23■□□□□ 0.99
Trpm3Q5F4S9 Gm27867-201ENSMUST00000184778 125 ntBASIC21.23■□□□□ 0.99
Trpm3Q5F4S9 Gm2651-201ENSMUST00000203560 838 ntBASIC21.23■□□□□ 0.99
Trpm3Q5F4S9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trpm3Q5F4S9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trpm3Q5F4S9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Trpm3Q5F4S9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC21.22■□□□□ 0.99
Trpm3Q5F4S9 Gm18206-201ENSMUST00000207027 926 ntBASIC21.22■□□□□ 0.99
Trpm3Q5F4S9 AC132104.2-201ENSMUST00000215011 266 ntBASIC21.22■□□□□ 0.99
Trpm3Q5F4S9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trpm3Q5F4S9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trpm3Q5F4S9 Gm32996-201ENSMUST00000199828 1447 ntBASIC21.22■□□□□ 0.99
Trpm3Q5F4S9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trpm3Q5F4S9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC21.21■□□□□ 0.99
Trpm3Q5F4S9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trpm3Q5F4S9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC21.21■□□□□ 0.99
Trpm3Q5F4S9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trpm3Q5F4S9 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trpm3Q5F4S9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC21.21■□□□□ 0.99
Trpm3Q5F4S9 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trpm3Q5F4S9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC21.21■□□□□ 0.99
Trpm3Q5F4S9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC21.21■□□□□ 0.99
Trpm3Q5F4S9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trpm3Q5F4S9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trpm3Q5F4S9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Trpm3Q5F4S9 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Trpm3Q5F4S9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC21.21■□□□□ 0.99
Trpm3Q5F4S9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trpm3Q5F4S9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trpm3Q5F4S9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trpm3Q5F4S9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trpm3Q5F4S9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trpm3Q5F4S9 Gm7507-201ENSMUST00000183053 1008 ntBASIC21.21■□□□□ 0.99
Trpm3Q5F4S9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC21.21■□□□□ 0.99
Trpm3Q5F4S9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Trpm3Q5F4S9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Trpm3Q5F4S9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Trpm3Q5F4S9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
Trpm3Q5F4S9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trpm3Q5F4S9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trpm3Q5F4S9 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trpm3Q5F4S9 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.2■□□□□ 0.98
Trpm3Q5F4S9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms