Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Rnf20Q5DTM8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC20.01■□□□□ 0.79
Rnf20Q5DTM8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf20Q5DTM8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf20Q5DTM8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC20.01■□□□□ 0.79
Rnf20Q5DTM8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf20Q5DTM8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.01■□□□□ 0.79
Rnf20Q5DTM8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Rnf20Q5DTM8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Rnf20Q5DTM8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Rnf20Q5DTM8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf20Q5DTM8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf20Q5DTM8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf20Q5DTM8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf20Q5DTM8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf20Q5DTM8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf20Q5DTM8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf20Q5DTM8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf20Q5DTM8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Rnf20Q5DTM8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20■□□□□ 0.79
Rnf20Q5DTM8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf20Q5DTM8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf20Q5DTM8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf20Q5DTM8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf20Q5DTM8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf20Q5DTM8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rnf20Q5DTM8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rnf20Q5DTM8 Gm30025-201ENSMUST00000218555 728 ntBASIC20■□□□□ 0.79
Rnf20Q5DTM8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20■□□□□ 0.79
Rnf20Q5DTM8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf20Q5DTM8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rnf20Q5DTM8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf20Q5DTM8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf20Q5DTM8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20■□□□□ 0.79
Rnf20Q5DTM8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Rnf20Q5DTM8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf20Q5DTM8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf20Q5DTM8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf20Q5DTM8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf20Q5DTM8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.99■□□□□ 0.79
Rnf20Q5DTM8 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf20Q5DTM8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.99■□□□□ 0.79
Rnf20Q5DTM8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf20Q5DTM8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf20Q5DTM8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.99■□□□□ 0.79
Rnf20Q5DTM8 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.99■□□□□ 0.79
Rnf20Q5DTM8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.99■□□□□ 0.79
Rnf20Q5DTM8 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf20Q5DTM8 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf20Q5DTM8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf20Q5DTM8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf20Q5DTM8 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf20Q5DTM8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf20Q5DTM8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf20Q5DTM8 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Rnf20Q5DTM8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.98■□□□□ 0.79
Rnf20Q5DTM8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf20Q5DTM8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Rnf20Q5DTM8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Rnf20Q5DTM8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf20Q5DTM8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Rnf20Q5DTM8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf20Q5DTM8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf20Q5DTM8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf20Q5DTM8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.97■□□□□ 0.79
Rnf20Q5DTM8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf20Q5DTM8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf20Q5DTM8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf20Q5DTM8 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf20Q5DTM8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf20Q5DTM8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC19.97■□□□□ 0.79
Rnf20Q5DTM8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf20Q5DTM8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Rnf20Q5DTM8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf20Q5DTM8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Rnf20Q5DTM8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms