Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf38aQ4FK66 Gm17971-201ENSMUST00000190239 806 ntBASIC19.61■□□□□ 0.73
Prpf38aQ4FK66 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf38aQ4FK66 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf38aQ4FK66 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.61■□□□□ 0.73
Prpf38aQ4FK66 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf38aQ4FK66 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf38aQ4FK66 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf38aQ4FK66 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.6■□□□□ 0.73
Prpf38aQ4FK66 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.6■□□□□ 0.73
Prpf38aQ4FK66 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf38aQ4FK66 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf38aQ4FK66 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.6■□□□□ 0.73
Prpf38aQ4FK66 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.6■□□□□ 0.73
Prpf38aQ4FK66 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf38aQ4FK66 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Prpf38aQ4FK66 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf38aQ4FK66 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.6■□□□□ 0.73
Prpf38aQ4FK66 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf38aQ4FK66 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf38aQ4FK66 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf38aQ4FK66 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Prpf38aQ4FK66 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf38aQ4FK66 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf38aQ4FK66 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf38aQ4FK66 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf38aQ4FK66 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf38aQ4FK66 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf38aQ4FK66 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf38aQ4FK66 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.59■□□□□ 0.73
Prpf38aQ4FK66 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.59■□□□□ 0.73
Prpf38aQ4FK66 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf38aQ4FK66 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf38aQ4FK66 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf38aQ4FK66 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf38aQ4FK66 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf38aQ4FK66 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf38aQ4FK66 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Prpf38aQ4FK66 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Prpf38aQ4FK66 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
Prpf38aQ4FK66 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.58■□□□□ 0.73
Prpf38aQ4FK66 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Prpf38aQ4FK66 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Prpf38aQ4FK66 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf38aQ4FK66 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf38aQ4FK66 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf38aQ4FK66 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf38aQ4FK66 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf38aQ4FK66 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Prpf38aQ4FK66 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf38aQ4FK66 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf38aQ4FK66 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf38aQ4FK66 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Prpf38aQ4FK66 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38aQ4FK66 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf38aQ4FK66 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Prpf38aQ4FK66 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf38aQ4FK66 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf38aQ4FK66 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf38aQ4FK66 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf38aQ4FK66 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf38aQ4FK66 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf38aQ4FK66 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf38aQ4FK66 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf38aQ4FK66 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf38aQ4FK66 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.56■□□□□ 0.72
Prpf38aQ4FK66 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf38aQ4FK66 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.56■□□□□ 0.72
Prpf38aQ4FK66 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.56■□□□□ 0.72
Prpf38aQ4FK66 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms