Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shank3Q4ACU6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shank3Q4ACU6 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Shank3Q4ACU6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shank3Q4ACU6 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shank3Q4ACU6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Shank3Q4ACU6 AC122901.1-201ENSMUST00000214203 1790 ntBASIC20.96■□□□□ 0.95
Shank3Q4ACU6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC20.96■□□□□ 0.95
Shank3Q4ACU6 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Shank3Q4ACU6 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC20.95■□□□□ 0.94
Shank3Q4ACU6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Shank3Q4ACU6 AC084391.1-201ENSMUST00000200651 141 ntBASIC20.95■□□□□ 0.94
Shank3Q4ACU6 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shank3Q4ACU6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.95■□□□□ 0.94
Shank3Q4ACU6 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shank3Q4ACU6 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shank3Q4ACU6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shank3Q4ACU6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Shank3Q4ACU6 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Shank3Q4ACU6 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shank3Q4ACU6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shank3Q4ACU6 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shank3Q4ACU6 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC20.95■□□□□ 0.94
Shank3Q4ACU6 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC20.95■□□□□ 0.94
Shank3Q4ACU6 Gm27628-201ENSMUST00000184911 107 ntBASIC20.95■□□□□ 0.94
Shank3Q4ACU6 AV026068-213ENSMUST00000223675 1171 ntBASIC20.95■□□□□ 0.94
Shank3Q4ACU6 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.95■□□□□ 0.94
Shank3Q4ACU6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shank3Q4ACU6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shank3Q4ACU6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shank3Q4ACU6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shank3Q4ACU6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shank3Q4ACU6 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shank3Q4ACU6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shank3Q4ACU6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Shank3Q4ACU6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shank3Q4ACU6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC20.94■□□□□ 0.94
Shank3Q4ACU6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shank3Q4ACU6 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Shank3Q4ACU6 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Shank3Q4ACU6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Shank3Q4ACU6 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shank3Q4ACU6 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shank3Q4ACU6 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shank3Q4ACU6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shank3Q4ACU6 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.94■□□□□ 0.94
Shank3Q4ACU6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shank3Q4ACU6 Gm9727-201ENSMUST00000161387 555 ntBASIC20.93■□□□□ 0.94
Shank3Q4ACU6 Gm6736-201ENSMUST00000166583 948 ntBASIC20.93■□□□□ 0.94
Shank3Q4ACU6 Auts2-212ENSMUST00000178555 309 ntBASIC20.93■□□□□ 0.94
Shank3Q4ACU6 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shank3Q4ACU6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Shank3Q4ACU6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shank3Q4ACU6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shank3Q4ACU6 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shank3Q4ACU6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shank3Q4ACU6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Shank3Q4ACU6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shank3Q4ACU6 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shank3Q4ACU6 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.92■□□□□ 0.94
Shank3Q4ACU6 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Shank3Q4ACU6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Shank3Q4ACU6 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shank3Q4ACU6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Shank3Q4ACU6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shank3Q4ACU6 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC20.92■□□□□ 0.94
Shank3Q4ACU6 Gm11780-201ENSMUST00000136880 516 ntBASIC20.92■□□□□ 0.94
Shank3Q4ACU6 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC20.92■□□□□ 0.94
Shank3Q4ACU6 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Shank3Q4ACU6 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC20.92■□□□□ 0.94
Shank3Q4ACU6 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.92■□□□□ 0.94
Shank3Q4ACU6 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shank3Q4ACU6 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shank3Q4ACU6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shank3Q4ACU6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shank3Q4ACU6 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Shank3Q4ACU6 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shank3Q4ACU6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shank3Q4ACU6 Gm6089-201ENSMUST00000197666 938 ntBASIC20.91■□□□□ 0.94
Shank3Q4ACU6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Shank3Q4ACU6 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC20.91■□□□□ 0.94
Shank3Q4ACU6 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Shank3Q4ACU6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shank3Q4ACU6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC20.91■□□□□ 0.94
Shank3Q4ACU6 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Shank3Q4ACU6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Shank3Q4ACU6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shank3Q4ACU6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shank3Q4ACU6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shank3Q4ACU6 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Shank3Q4ACU6 Gm8969-201ENSMUST00000199694 526 ntBASIC20.9■□□□□ 0.94
Shank3Q4ACU6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Shank3Q4ACU6 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shank3Q4ACU6 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shank3Q4ACU6 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.9■□□□□ 0.94
Shank3Q4ACU6 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shank3Q4ACU6 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Shank3Q4ACU6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shank3Q4ACU6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Shank3Q4ACU6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms