Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SfswapQ3USH5 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
SfswapQ3USH5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SfswapQ3USH5 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SfswapQ3USH5 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.03■□□□□ 0.8
SfswapQ3USH5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.03■□□□□ 0.8
SfswapQ3USH5 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.03■□□□□ 0.8
SfswapQ3USH5 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SfswapQ3USH5 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SfswapQ3USH5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SfswapQ3USH5 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SfswapQ3USH5 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SfswapQ3USH5 Rarb-207ENSMUST00000225921 2756 ntBASIC20.03■□□□□ 0.8
SfswapQ3USH5 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SfswapQ3USH5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
SfswapQ3USH5 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SfswapQ3USH5 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SfswapQ3USH5 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SfswapQ3USH5 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SfswapQ3USH5 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.02■□□□□ 0.8
SfswapQ3USH5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SfswapQ3USH5 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SfswapQ3USH5 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
SfswapQ3USH5 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SfswapQ3USH5 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SfswapQ3USH5 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SfswapQ3USH5 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SfswapQ3USH5 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.02■□□□□ 0.8
SfswapQ3USH5 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SfswapQ3USH5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SfswapQ3USH5 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SfswapQ3USH5 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SfswapQ3USH5 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.02■□□□□ 0.8
SfswapQ3USH5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SfswapQ3USH5 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SfswapQ3USH5 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SfswapQ3USH5 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SfswapQ3USH5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SfswapQ3USH5 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SfswapQ3USH5 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SfswapQ3USH5 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SfswapQ3USH5 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.01■□□□□ 0.79
SfswapQ3USH5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.01■□□□□ 0.79
SfswapQ3USH5 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SfswapQ3USH5 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SfswapQ3USH5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SfswapQ3USH5 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SfswapQ3USH5 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
SfswapQ3USH5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SfswapQ3USH5 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SfswapQ3USH5 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SfswapQ3USH5 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20■□□□□ 0.79
SfswapQ3USH5 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SfswapQ3USH5 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SfswapQ3USH5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SfswapQ3USH5 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC20■□□□□ 0.79
SfswapQ3USH5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20■□□□□ 0.79
SfswapQ3USH5 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20■□□□□ 0.79
SfswapQ3USH5 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
SfswapQ3USH5 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SfswapQ3USH5 Zkscan4-202ENSMUST00000225845 1506 ntBASIC20■□□□□ 0.79
SfswapQ3USH5 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SfswapQ3USH5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SfswapQ3USH5 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SfswapQ3USH5 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SfswapQ3USH5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SfswapQ3USH5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SfswapQ3USH5 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SfswapQ3USH5 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SfswapQ3USH5 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SfswapQ3USH5 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SfswapQ3USH5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SfswapQ3USH5 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.99■□□□□ 0.79
SfswapQ3USH5 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SfswapQ3USH5 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SfswapQ3USH5 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.99■□□□□ 0.79
SfswapQ3USH5 Gm18115-201ENSMUST00000221209 621 ntBASIC19.99■□□□□ 0.79
SfswapQ3USH5 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SfswapQ3USH5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SfswapQ3USH5 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SfswapQ3USH5 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SfswapQ3USH5 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SfswapQ3USH5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SfswapQ3USH5 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SfswapQ3USH5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SfswapQ3USH5 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SfswapQ3USH5 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SfswapQ3USH5 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SfswapQ3USH5 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.98■□□□□ 0.79
SfswapQ3USH5 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.98■□□□□ 0.79
SfswapQ3USH5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.98■□□□□ 0.79
SfswapQ3USH5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SfswapQ3USH5 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SfswapQ3USH5 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SfswapQ3USH5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SfswapQ3USH5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SfswapQ3USH5 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SfswapQ3USH5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SfswapQ3USH5 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SfswapQ3USH5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms